Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05120 and BL03473

See Amino acid alignment / Visit BSNT_05120 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:14
# Commandline: needle
#    -asequence dna-align/BSNT_05120___yvbG.1.5803.seq
#    -bsequence dna-align/BL03473___yvbG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05120___yvbG-BL03473___yvbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05120___yvbG-BL03473___yvbG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05120___yvbG
# 2: BL03473___yvbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity:     468/657 (71.2%)
# Similarity:   468/657 (71.2%)
# Gaps:          48/657 ( 7.3%)
# Score: 1585.0
# 
#
#=======================================

BSNT_05120___      1 ATGTTCTCATTCATCGTTCACGTTCTCATTTCTTTATTCGCAGTATCGAA     50
                     .||||..|.||.|||.|.||||||.|..|.||.||.|||||.||..|.||
BL03473___yvb      1 GTGTTTGCTTTTATCATCCACGTTTTTGTATCATTGTTCGCCGTCACAAA     50

BSNT_05120___     51 TCCGATCGGAAACGTACCGATATTTCTGACGCTGACAGAAGGCTATACTG    100
                     |||||||||.||.||.|||||.|||.|..||||.|||||||||||   .|
BL03473___yvb     51 TCCGATCGGCAATGTTCCGATCTTTTTAGCGCTCACAGAAGGCTA---CG     97

BSNT_05120___    101 CAGCGGAAAGAA--AAGCG-ATT-GCCCGGAAGGCAGCTATTTTATCCTT    146
                     .||| |||||||  .|.|| ||| ||..|.|||||.||..|||||||.||
BL03473___yvb     98 AAGC-GAAAGAACGCACCGCATTGGCGAGAAAGGCCGCGGTTTTATCGTT    146

BSNT_05120___    147 TTTTATTCTCGCAGCTTTTTTGTTTTTCGGTCATCTTATCTTTAAACTGT    196
                     |.|.||.||....||.|||.|..|.|||||..|..|||||||.|..||.|
BL03473___yvb    147 TCTGATCCTGATCGCGTTTCTCATATTCGGAGAGTTTATCTTCAGGCTTT    196

BSNT_05120___    197 TTGATATCAACATTCACGCGCTACGAGTGGCGGGCGGCATATTCATTTTC    246
                     ||||.||||||||.||.|||||.|||.|.||.|||||||||||.||.|||
BL03473___yvb    197 TTGACATCAACATCCATGCGCTGCGAATTGCCGGCGGCATATTTATATTC    246

BSNT_05120___    247 GGCATTGCCTATAATCTATTGAATGCGAAAG-AATCCCATGTGCAATCTC    295
                     ||.||||||||.||.||..||||||| |||| |.||||||||.||.||.|
BL03473___yvb    247 GGAATTGCCTACAACCTGCTGAATGC-AAAGCAGTCCCATGTTCAGTCGC    295

BSNT_05120___    296 TTCACCATGATGAACATAAGGAAAGCAAGGAAAAAGCGGATATATCAGTC    345
                     |.||.||||.|||.|||...||.|||||||||||.|.|||||||||.||.
BL03473___yvb    296 TGCATCATGCTGAGCATCGCGAGAGCAAGGAAAAGGAGGATATATCGGTG    345

BSNT_05120___    346 ACACCTTTATCCATTCCGATCATTGCTGGGCCCGGAACGATTGCAACAGT    395
                     ||.||..|...|||||||||||||.|.|||||.|||||||||||.||.||
BL03473___yvb    346 ACGCCGCTCAGCATTCCGATCATTTCGGGGCCAGGAACGATTGCGACGGT    395

BSNT_05120___    396 GATGAGCCTTTCCGCCGGACATAGCGGCA--TTGGT-CATTATGCGGCTG    442
                     ||||||||||||.||||||   |||.|||  .|||| ||||.|  |||.|
BL03473___yvb    396 GATGAGCCTTTCGGCCGGA---AGCCGCAGTCTGGTGCATTTT--GGCGG    440

BSNT_05120___    443 --TCATGATCGGCATAGCCGCCGTTATTGCC--CTGACCTTT----CTCT    484
                       |.||.||||||||.||||||||..|  ||  |||||.|||    | ||
BL03473___yvb    441 AATGATCATCGGCATCGCCGCCGTCCT--CCTGCTGACGTTTGCGGC-CT    487

BSNT_05120___    485 TTTTCCACTATTCTGCTTTTATCAGCAGCAAACTCGGAAAAACTGAGATG    534
                     ||   ||.||||||.|..|.|||||||.||||.|.||..|.||.||||||
BL03473___yvb    488 TT---CATTATTCTACGCTGATCAGCAACAAATTGGGCCAGACGGAGATG    534

BSNT_05120___    535 AATGTGATTACCAGACTGATGGGATTAATCTTAGCCGTGGTTGCGGTCGG    584
                     ||.|||||.|||.|.||||||||..|.||.||.||.||.||.||||||||
BL03473___yvb    535 AACGTGATCACCCGGCTGATGGGCCTGATTTTGGCTGTCGTGGCGGTCGG    584

BSNT_05120___    585 GATGATTGGTGCGGGGCTGAAAGGCATGTTTCCGATCT--------TAAC    626
                     .|||||.||..||||..|||||||.|||||||||.|.|        ||| 
BL03473___yvb    585 CATGATCGGAACGGGATTGAAAGGGATGTTTCCGGTGTTGGCGGGATAA-    633

BSNT_05120___    627 CTCATGA    633
                            
BL03473___yvb    633 -------    633


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