Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02813 and BL03490

See Amino acid alignment / Visit BSNT_02813 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:34
# Commandline: needle
#    -asequence dna-align/BSNT_02813.1.5803.seq
#    -bsequence dna-align/BL03490.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02813-BL03490.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02813-BL03490.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02813
# 2: BL03490
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 570
# Identity:     423/570 (74.2%)
# Similarity:   423/570 (74.2%)
# Gaps:          27/570 ( 4.7%)
# Score: 1507.5
# 
#
#=======================================

BSNT_02813         1 ATGAATCCATTACAGGATTTTGAACTAAATGAAATT---AATAACGGCGA     47
                     ||||||||.|||||||..|||||||||||.||.|||   |||||..||  
BL03490            1 ATGAATCCTTTACAGGCGTTTGAACTAAACGAGATTTCAAATAATAGC--     48

BSNT_02813        48 ACTGC--CGGGAGA-CCGTCCACAATTTGAAATTACTGATATGAACAGCC     94
                      ||||  |.||||| |||||||||.|||||.|||||.||.|||||.||.|
BL03490           49 -CTGCAGCAGGAGAGCCGTCCACAGTTTGAGATTACGGACATGAATAGTC     97

BSNT_02813        95 TGAATTGGGCTTTCCGGAAAATAGCTGCACTTAAGTCGCAGGAAAAGGAA    144
                     |.||||||||.||.||||||||||||||..|.|||.|.||||||||.|||
BL03490           98 TAAATTGGGCGTTTCGGAAAATAGCTGCTTTAAAGACACAGGAAAAAGAA    147

BSNT_02813       145 ATCAAAGCACTGGCAGCCACAGAAAAGCAACGTATTGAAGAATGGGAAAG    194
                     |||||.||.|||||.||.||.||||.|||.|||||.||.||||||||||.
BL03490          148 ATCAAGGCTCTGGCGGCAACGGAAAGGCAGCGTATCGATGAATGGGAAAC    197

BSNT_02813       195 GCAGGAGCTTAAGCCTTTAGCTGACAGTCTTTCATTCTTTGAAAACCTGG    244
                     .||||||||.||.|||.|.||.||||.|||..|.|||||||||||.||||
BL03490          198 TCAGGAGCTAAAACCTCTCGCGGACAATCTGGCGTTCTTTGAAAAACTGG    247

BSNT_02813       245 TTAGTGTCTATCATACAAAGCAGC---TGCAGGAAGACCCGAAGGCAAAA    291
                     |.||.||.|||||..|||||||||   |.|||   ||.||.||.||||||
BL03490          248 TCAGCGTTTATCACTCAAAGCAGCTCGTTCAG---GATCCAAAAGCAAAA    294

BSNT_02813       292 ACTCTTTCCACACCTTATGGGAAATCTAAAAGCCGGACCACAAAAGCAGC    341
                     ||.||||||||||||||.||.||.||.||||||||.||.|..|||| |||
BL03490          295 ACACTTTCCACACCTTACGGTAAGTCAAAAAGCCGCACAATTAAAG-AGC    343

BSNT_02813       342 -GCCTAAAGAAGTGGACAAGGAAAAACTTCTGCAGCATGTGAAGGATGCC    390
                      ||||||...|...||.|||||..|.|||||..||||||||||.||.|||
BL03490          344 AGCCTAAGCCAACCGATAAGGATCAGCTTCTCAAGCATGTGAAAGAGGCC    393

BSNT_02813       391 GGTATGGAGGAGTTTATAAAAGAGTCTGTGGCATGGGGCGATCTTAAGAA    440
                     |||.|....||.|||||.|||||...|||...|||||||||.|||||.||
BL03490          394 GGTCTCACTGAATTTATCAAAGAAGATGTCAAATGGGGCGACCTTAAAAA    443

BSNT_02813       441 GACAT-TGACTGTC----ACTGAGCTTGAAGGTAAACCGATCGTAATTGA    485
                        || |  |||||    |..|||.|.||.||.|||..|.|.||..||||
BL03490          444 ---ATCT--CTGTCCATTAAAGAGGTGGACGGCAAAAAGGTTGTCGTTGA    488

BSNT_02813       486 TTCAAATGGACAAGCTGTCCCCGGCGTAGAAGTACAGCCAGAAACAATCA    535
                     |..|||||||||||.|||.||.|||||||||.||.|.||.|...|.|..|
BL03490          489 TGAAAATGGACAAGTTGTTCCGGGCGTAGAAATAGAACCTGCCTCCACAA    538

BSNT_02813       536 GTTTCAAAGTGGAGGTGTGA    555
                     |.||||||||||||||||.|
BL03490          539 GCTTCAAAGTGGAGGTGTAA    558


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