Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02819 and BL03496

See Amino acid alignment / Visit BSNT_02819 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:35
# Commandline: needle
#    -asequence dna-align/BSNT_02819.1.5803.seq
#    -bsequence dna-align/BL03496.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02819-BL03496.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02819-BL03496.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02819
# 2: BL03496
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity:     447/541 (82.6%)
# Similarity:   447/541 (82.6%)
# Gaps:           2/541 ( 0.4%)
# Score: 1847.0
# 
#
#=======================================

BSNT_02819         1 ATGACAATTATTCACTATAACTATTCGGAAACGGAATTAAAAGAAATTCT     50
                     |||||.|||||||||||||||||||||||.||.|||||||||.|.|||||
BL03496            1 ATGACGATTATTCACTATAACTATTCGGATACAGAATTAAAAAATATTCT     50

BSNT_02819        51 GGACAGCATGATCATTATTGTGGATACGAGAGAGCAAAAGAATCAGCATG    100
                     .|||||||||||||||||||||||||||||.|||||.|||||.|||||||
BL03496           51 CGACAGCATGATCATTATTGTGGATACGAGGGAGCAGAAGAACCAGCATG    100

BSNT_02819       101 TTCTTGATTATCTCCGTAAAAAGAAAGTGGGAATCAAATTCAAAGGAATG    150
                     |||||||.||||||||.||||||||.||....||||||||||||||.|||
BL03496          101 TTCTTGACTATCTCCGCAAAAAGAACGTATCTATCAAATTCAAAGGGATG    150

BSNT_02819       151 AAAACCGGCGATTACTCTGCAATGATTCCTAAAAATGATGAATTTGGAAT    200
                     ||.||.|||||.||.|||||.|||||.||.|||||.||.||||..||.||
BL03496          151 AAGACGGGCGACTATTCTGCCATGATCCCGAAAAACGAGGAATACGGGAT    200

BSNT_02819       201 CAGCCGTGATATGTATTTGAATGCAGCAATTGAACGGAAAAATGGAGTGG    250
                     .|||||.||.|||||||||||.||.||.||.|||||||||||||||||.|
BL03496          201 TAGCCGGGACATGTATTTGAACGCTGCTATCGAACGGAAAAATGGAGTTG    250

BSNT_02819       251 ACGAGTTGGTGCAGTCGATTAAAGACCGTTCTCGTTTTGAAAATGAATTG    300
                     |.|||.||||.||.||.|||||.|||||||||||.|||||||||||||||
BL03496          251 ATGAGCTGGTTCAATCCATTAAGGACCGTTCTCGGTTTGAAAATGAATTG    300

BSNT_02819       301 ATCCGGGCGTCCAGGCATCCGTTCACTCTTCTTGTGGAAGACCTGGAAGG    350
                     |||||.||..|||..||.||.|||||||||||||||||.||.||||||||
BL03496          301 ATCCGTGCAGCCAAACACCCCTTCACTCTTCTTGTGGAGGATCTGGAAGG    350

BSNT_02819       351 GTATCAAAAAATACTGAACGGAAAATATCGTTCAAAGTATGAACCGAAAG    400
                     .||.|||||||||.||||||||||||||||.|||.|.|||.|.|||.||.
BL03496          351 CTACCAAAAAATATTGAACGGAAAATATCGCTCACAATATAAGCCGCAAT    400

BSNT_02819       401 CGCTGCTGGGCAGCTTGAAAACATTTGAGGTTCGCTACGGCTTTTCAACT    450
                     |..||||.||||||||.|||||.|||||.||.||.|||...||.|||||.
BL03496          401 CTTTGCTTGGCAGCTTAAAAACGTTTGAAGTCCGTTACAATTTCTCAACC    450

BSNT_02819       451 GTTTTTCTTAGCCCTAACGCTACCGGAAATTACATTTACCATCACTTTCA    500
                     ||||||.|||..||.|.|||.||||||||.||.||.||.||.||.|||||
BL03496          451 GTTTTTATTAATCCGAGCGCGACCGGAAACTATATCTATCACCATTTTCA    500

BSNT_02819       501 TTATATGGCCCGGGAACTGCTGAAAGGCGGG-CTTGTGTAA    540
                     |||||||||||||||.||| |.|||||.||| |||||||.|
BL03496          501 TTATATGGCCCGGGAGCTG-TTAAAGGGGGGCCTTGTGTGA    540


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