Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02821 and BL03499
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence dna-align/BSNT_02821.1.5803.seq
# -bsequence dna-align/BL03499.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02821-BL03499.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02821-BL03499.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02821
# 2: BL03499
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity: 288/396 (72.7%)
# Similarity: 288/396 (72.7%)
# Gaps: 33/396 ( 8.3%)
# Score: 1058.0
#
#
#=======================================
BSNT_02821 1 --GTGACA-GAACAACTTTCATTCCTTCATCCTGTGGATTTGAAGGCAGT 47
||.|.| |||||.||.||.||.||..||..||||||....||.||.||
BL03499 1 ATGTCAAAGGAACAGCTATCTTTTCTCGATGATGTGGACGAAAAAGCCGT 50
BSNT_02821 48 CCGAAAAATTGTGATCAAAGAACTCAAAGATTATCGAGCTTTGAAAGTAC 97
|||.|||||.||.|||||||||.|.|||.||||.||.||..|.|||||.|
BL03499 51 CCGGAAAATAGTCATCAAAGAATTGAAAAATTACCGCGCGCTCAAAGTCC 100
BSNT_02821 98 AGCTTGAGAATAAAAAGGAATCGGTTGACGCTGGCATCAGCCCG------ 141
|..|.|||||||||||.|||| ||| ||||.|||.|
BL03499 101 AATTAGAGAATAAAAAAGAAT--GTT--------CATCTGCCGGCTTTAA 140
BSNT_02821 142 ----TTTCCTTCTATCAGAGATTCTTTCATATTAAATGAACTGAAGGTCA 187
||.|||||..||.|.|||||.||.|...|.||||||||.||.||||
BL03499 141 CATTTTCCCTTCCCTCCGGGATTCATTTACCGTTAATGAACTCAAAGTCA 190
BSNT_02821 188 AACAGATGGAAAGGGCGTTAGAAAACAGCCTGGACGATGAAGAACGGATG 237
|||||||||||.||||.|||.||||||||.||||||||||||||||..||
BL03499 191 AACAGATGGAACGGGCTTTACAAAACAGCTTGGACGATGAAGAACGTTTG 240
BSNT_02821 238 ATCATTGAGAAAAAATACTTAACAGCCAGCCAAACA-----AAAGACATT 282
||.||.||.||.||||||.|.|| |.|.|| || ||||||||.
BL03499 241 ATTATCGAAAAGAAATACCTGAC-GGCTGC----CAGGGTGAAAGACATC 285
BSNT_02821 283 CATATCTATATGGAACTTGGCATGAAAAAGGACACCTATTATGAAATAAA 332
.||||.|||||||||||.||||||||||||||.|||||||||||||||||
BL03499 286 AATATTTATATGGAACTCGGCATGAAAAAGGATACCTATTATGAAATAAA 335
BSNT_02821 333 ACATCGTGCCATTTTGCGCATTGCTACAGCACTCGGAATTATCTGA 378
.||.||.||.||.|..||.|||||.|||||||||||||||||||||
BL03499 336 GCAGCGGGCAATCTGCCGTATTGCAACAGCACTCGGAATTATCTGA 381
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