Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02270 and BL03532
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence dna-align/BSNT_02270___ykrM.1.5803.seq
# -bsequence dna-align/BL03532___ktrD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02270___ykrM-BL03532___ktrD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02270___ykrM-BL03532___ktrD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02270___ykrM
# 2: BL03532___ktrD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1384
# Identity: 994/1384 (71.8%)
# Similarity: 994/1384 (71.8%)
# Gaps: 68/1384 ( 4.9%)
# Score: 3432.0
#
#
#=======================================
BSNT_02270___ 1 ATGAGATTAAAGTTTGGAAAATTGA------TACAG-GCCT--TGTCACC 41
||.||.|||| .||||| |||.| ||.| ||||.||
BL03532___ktr 1 -----ATGAAGGTTT----TATTGAGAAAACTACTGCGCGTGCTGTCTCC 41
BSNT_02270___ 42 GGCCCAGCTGATCGCATTATATTATTTTCTTGCAGTTACTGTGGCCGTTA 91
.|..|||||||||||..|.|||||||||.|.||.||.||.||..|.|||.
BL03532___ktr 42 TGTACAGCTGATCGCGCTCTATTATTTTTTAGCGGTGACAGTTTCGGTTG 91
BSNT_02270___ 92 TATTGCTGAGTTTGCCGGCGGCCCATAAACCGGGGGCGGATTGGACGTTT 141
|.||..|||||.||||.|..||.||.|||......|..||.|||.|.|||
BL03532___ktr 92 TTTTATTGAGTCTGCCCGTTGCACACAAAAATAATGTTGAATGGTCTTTT 141
BSNT_02270___ 142 ATTGATGCGCTTTTTACAGCTGTCAGTTCAGTCAGCGTAACGGGGCTGAC 191
||.||.||.||||||||.||.||.||..||||.||.|||||.||..||||
BL03532___ktr 142 ATCGACGCCCTTTTTACCGCGGTGAGCGCAGTGAGTGTAACCGGTTTGAC 191
BSNT_02270___ 192 GGTAGTTGATACAGCTGATACATTCAGCACAATAGGGATTTTTATATTAG 241
|||.|||||||||||.||||||||||||||....||.||||..||.||.|
BL03532___ktr 192 GGTTGTTGATACAGCCGATACATTCAGCACGGCCGGAATTTGGATTTTGG 241
BSNT_02270___ 242 CATTTGTTCTGCAATTTGGCGGAATCGGAATTATGACGCTCGGAACGTTC 291
|.||||||||||||||||||||.|||||..|.|||.|..|.||.||.|||
BL03532___ktr 242 CGTTTGTTCTGCAATTTGGCGGGATCGGCGTGATGGCTTTGGGTACATTC 291
BSNT_02270___ 292 ATTTGGCTGATCATGGGAAAACGAATCGGGCTGAAAGAACGGAAGCTGAT 341
.|.||||||||..|.||.||.||.|||||..|||||||.||....|||||
BL03532___ktr 292 GTCTGGCTGATTTTCGGCAAGCGGATCGGTTTGAAAGAGCGCCGTCTGAT 341
BSNT_02270___ 342 TATGGTTGATCAAAACCAATCCCAGTTTTCAGGAATTGTCAATCTGATGA 391
||||...||||||||.||||||.|.||.||.||..|.|||||.|||||||
BL03532___ktr 342 TATGACCGATCAAAATCAATCCAACTTATCGGGCCTCGTCAAGCTGATGA 391
BSNT_02270___ 392 AGCAGGTACT--GTTTCTGATCTTGTGGATTGAATTTTTTGGCGGGCTGA 439
||||.||.|| |.| |.|||.||..|||.||..|.|||||||||||||
BL03532___ktr 392 AGCACGTGCTCGGCT--TAATCCTGCTGATCGAGCTGTTTGGCGGGCTGA 439
BSNT_02270___ 440 TTCTCGGCACATATTTCTTAACCTACTAT--GACTCCTATCAG--GAAGC 485
||||||||||.||||||||||..||||.| |||.||| | |||||
BL03532___ktr 440 TTCTCGGCACTTATTTCTTAAAGTACTTTGAGACACCT----GGAGAAGC 485
BSNT_02270___ 486 TTATTTACACGGATTTTTTGCCAGTATCAGTGCAACGACAAACGGCGGAT 535
.|.|.|.||||||||||||.|.||.||||||||||||||.|||||.||.|
BL03532___ktr 486 CTTTATGCACGGATTTTTTACAAGCATCAGTGCAACGACCAACGGAGGTT 535
BSNT_02270___ 536 TTGATATTACCGGTAATTCGATGATTCCATTTCGCCACGATTACTTTGTG 585
|.||.|||||.||.||.|||.|||||||.||||..||.|||||.||.||.
BL03532___ktr 536 TCGACATTACAGGCAACTCGCTGATTCCGTTTCAGCATGATTATTTCGTT 585
BSNT_02270___ 586 CAGTTTATTACAATGCTTTTAATTATATTTGGAGCGATTGGATTTCCCGT 635
||||||||....|||.|..|.||.||..||||||||||.||.|||||.||
BL03532___ktr 586 CAGTTTATCGTGATGATGCTGATCATTCTTGGAGCGATCGGTTTTCCGGT 635
BSNT_02270___ 636 GCTTGTTGAAGTAAAGGATTTCCTG-TTTTCAAAGCATCGGCGTTA--TC 682
.||..|.||.|||||||||||.||| |...||||| .||||.| ||
BL03532___ktr 636 CCTCATCGAGGTAAAGGATTTTCTGCTCAGCAAAG----AGCGTAAATTC 681
BSNT_02270___ 683 -CATTTACGCTTTTTACAAAGATCACGACGATT-ACGTTCGGCTCACTTG 730
|.||.|..||.|||||.|| ||| ||.|..| |.||||.
BL03532___ktr 682 TCTTTCAGCCTGTTTACTAA----------ATTGACATCAG--TAACTTT 719
BSNT_02270___ 731 T---CTTGT-----TTGGA---GCCATTGGCATCTTTGCCCTGGAAGCAA 769
| |||.| ||||| ||.||.|||||.||||||.|||||||..
BL03532___ktr 720 TTTCCTTTTAGTAATTGGAGGTGCGATCGGCATATTTGCCATGGAAGCGC 769
BSNT_02270___ 770 ACCATGCGTTCGCGGGAAAATCATGGCATGA--TATTTTGTTTTTGTCCC 817
.|..|||.||..|.||.|||||.|||||.|| ||||| ||.||.||.|
BL03532___ktr 770 GCTTTGCTTTTTCAGGGAAATCGTGGCACGAGGTATTT--TTCTTTTCTC 817
BSNT_02270___ 818 TGTTTCAATCAACGGCAACCCGAAGCGGGGGACTGGCAACAATCGATATC 867
|||||||.||.|||.|.|||.|.|||||.|||||.||.||.|||||||||
BL03532___ktr 818 TGTTTCAGTCGACGACGACCAGGAGCGGCGGACTCGCGACGATCGATATC 867
BSNT_02270___ 868 AGCCAATTATCAGATTCCACACTCTTTTTTATTTGTGCGCTGATGTTTAT 917
||||||||..|..||.|.||..|.||.|||||.|||..|||.||||||||
BL03532___ktr 868 AGCCAATTCACGCATACGACCATTTTGTTTATGTGTATGCTTATGTTTAT 917
BSNT_02270___ 918 CGGAGCGTCGCCAAGCTCAGTCGGGGGAGGCATACGGACAACGACTTTTG 967
|||.||.|||||||||||.|||||.||.|||||.|||||||||||.||||
BL03532___ktr 918 CGGCGCTTCGCCAAGCTCTGTCGGAGGGGGCATCCGGACAACGACCTTTG 967
BSNT_02270___ 968 CTTTGAACCTTCTTGCGCTGTTTCATTTTGCCCGCGGCAATAAGGCCGTA 1017
|.||.|||||..|.||.|||||.||.||.||..|.||.|||||..|.||.
BL03532___ktr 968 CCTTAAACCTGTTGGCCCTGTTCCACTTCGCGAGGGGAAATAAATCGGTG 1017
BSNT_02270___ 1018 AAGGTATTCAAACGGGAGCTTCACCCTGCTGACTTGATGAAGTCGCTTG- 1066
|||||.||||||.||||.||.||||..||.|||||||||||.|| .|||
BL03532___ktr 1018 AAGGTTTTCAAAAGGGAACTGCACCAAGCGGACTTGATGAAATC-ATTGA 1066
BSNT_02270___ 1067 TTGTCACGATGATGGCGATCCTGCTCGTTTTTGGCGCGACACTCATTCTG 1116
||||.|||.||||||||.|..|.||.|||||.|.|.|||||||||||.||
BL03532___ktr 1067 TTGTAACGCTGATGGCGGTTATTCTTGTTTTCGTCTCGACACTCATTTTG 1116
BSNT_02270___ 1117 ACCATTACAGAAAAACATTCCCTGCTGGAGCTTTTGTTTGAAGTGTGCTC 1166
||..|.||||||||.|||||..||||.||.||..|||||||||||||.||
BL03532___ktr 1117 ACAGTGACAGAAAAGCATTCTTTGCTTGAACTGCTGTTTGAAGTGTGTTC 1166
BSNT_02270___ 1167 GGCATTCGGTACAACCGGCCTGTCGCTTGGAATTACGGCAGATTTGAGCA 1216
|||.||||||||.||.|||.|||||.|.||.||.||..||||||||||||
BL03532___ktr 1167 GGCCTTCGGTACGACGGGCTTGTCGATGGGCATCACCCCAGATTTGAGCA 1216
BSNT_02270___ 1217 GTGTTGGAAAATGCGTCATTATGATTGTCATGTTTATCGGGCGAATCGGC 1266
...||||.|||.|||||||.||..||.|.|||||.||.||.|||||||||
BL03532___ktr 1217 CGATTGGCAAAAGCGTCATCATCCTTCTGATGTTCATTGGCCGAATCGGC 1266
BSNT_02270___ 1267 ATCCTGACCTTCCTGTATCTGATCGGAAGAAAGGAAATTGAAGCGAACTA 1316
||..|.||..|.||.|||.|..||||.|||||.|||||.||||||||.||
BL03532___ktr 1267 ATTGTCACGCTGCTTTATTTATTCGGCAGAAAAGAAATCGAAGCGAATTA 1316
BSNT_02270___ 1317 TCACTATCCGAAAGAAAGAGTGATTATCGGATAG 1350
.||.||.|||||.|||||..|.|||||||||||.
BL03532___ktr 1317 CCATTACCCGAAGGAAAGGATCATTATCGGATAA 1350
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