Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02277 and BL03536
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence dna-align/BSNT_02277___kinE.1.5803.seq
# -bsequence dna-align/BL03536___kinE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02277___kinE-BL03536___kinE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02277___kinE-BL03536___kinE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02277___kinE
# 2: BL03536___kinE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2355
# Identity: 1573/2355 (66.8%)
# Similarity: 1573/2355 (66.8%)
# Gaps: 282/2355 (12.0%)
# Score: 5064.0
#
#
#=======================================
BSNT_02277___ 1 AT---GGAAACTCTTGGTGTCCA-GACAAACTCGGAGCTGCGAGAGGAAC 46
|| |||||||||||.|.|..| || |..||...|.||||.|.|..|.|
BL03536___kin 1 ATGGAGGAAACTCTTGATTTGAATGA-ATCCTTAAATCTGCAAAACCAGC 49
BSNT_02277___ 47 TGAATCGCCTCAAAGAAGAAAACGCGCGA-CTGAAAAAGGAATTGAATCA 95
||||..|.||.|...|||||||||| |.| ||||||..|||.|||.||||
BL03536___kin 50 TGAACAGACTGAGGAAAGAAAACGC-CAAGCTGAAAGCGGATTTGTATCA 98
BSNT_02277___ 96 GCATCAAGTGATTGTCAACAATACGCTCGATGCTATTTTTAT-TTGTGAT 144
|.||.|..||.|..|.|||...|||||.||.||||||||||| ||| |||
BL03536___kin 99 GTATGAGCTGCTGTTTAACGGGACGCTGGACGCTATTTTTATATTG-GAT 147
BSNT_02277___ 145 AACGAAATGCGGATTGTTCAGGCAAATGAAG-CAACAGAAAGGATGCTTC 193
||..|.|||...||..||.||||.|||||.| |..|.|.|| |||.||.|
BL03536___kin 148 AAACAGATGAACATCATTAAGGCGAATGATGCCGCCTGCAA-GATCCTGC 196
BSNT_02277___ 194 AAGTTGACTCGGAAG-----------ATTTGAAAAAGCGTTCTGTTTTGG 232
| ||| |||||...||.||.||.|...|.|
BL03536___kin 197 A-----------AAGCCAAAAAAAGAATTTGCTGAACCGGTCGGCGCTCG 235
BSNT_02277___ 233 ATTTTTTGTTTTCA----ATCCCAAAGGATGAACTGAATCTTTCCGTAAA 278
|.||..|| || .|.||...|||||||||.||.| |
BL03536___kin 236 ACTTCCTG----CACGCCGTTCCGCCGGATGAACTAAACC---------A 272
BSNT_02277___ 279 GAA--------GTTTTTT----------------AAAAAAGGCTTTCTGT 304
||| |.||.|| ||||||
BL03536___kin 273 GAACATTCACCGCTTCTTGGAGCGGGGATATGCGAAAAAA---------- 312
BSNT_02277___ 305 GGAAGGAGGTTCCGATCAGGCTTGATTGCGGGGCAAC--------AAAAT 346
||.||..|.||||||||||| |||| .||||
BL03536___kin 313 -----GAAGTGGCCATCAGGCTTGA--------CAACGGATCTGTCAAAT 349
BSNT_02277___ 347 ACATAGAGTTTCTGGCCAAAAGAGGCATTGGTGAGGATTTCTTTTTTGTT 396
|.||.||.|||...||.|..|.|||.||.||||||||.|.|||||||||.
BL03536___kin 350 ATATCGAATTTACCGCAAGCAAAGGAATCGGTGAGGACTGCTTTTTTGTC 399
BSNT_02277___ 397 GTCATGAGGGACATATCTTCTAAGAAGATTCTGGAGCGGGAATTCTCTAT 446
||||||||.|||||.||.|||||.||.||..||||||||||...|.|.||
BL03536___kin 400 GTCATGAGAGACATTTCGTCTAAAAAAATATTGGAGCGGGAGCGCACCAT 449
BSNT_02277___ 447 GAATGAACAGCTTTTTAAGGACTTGTTTGACAGAGCAGTTGACGGAATCG 496
.||||||.||||.|||||.||.||||||.||.|.||.|||||.|||||||
BL03536___kin 450 CAATGAAAAGCTGTTTAAAGATTTGTTTCACCGCGCGGTTGAAGGAATCG 499
BSNT_02277___ 497 TCCTGTTTGATAAAGATGGCGGTTTTATTGATGCCAATTTGTCCTTTTGT 546
||.|.|||||||||.|.|||.||||.||.|||||.||....||.|||||.
BL03536___kin 500 TCATCTTTGATAAACAAGGCTGTTTCATCGATGCAAACCATTCGTTTTGC 549
BSNT_02277___ 547 AAAAGCTTTGAAAT----CAATC----------ATAATG-AGCTGTCTCA 581
.|.|||||.||||| .|||| |.|.|| ||||||||||
BL03536___kin 550 CAGAGCTTCGAAATTGAAAAATCAGAGCTCTCAAAACTGAAGCTGTCTCA 599
BSNT_02277___ 582 TT---TATCTTTGTATGAGTTCATAGACA----GCGGCTCACGAAAAGAT 624
.| |||| |..||| |.||| |||||
BL03536___kin 600 ATTCGTATC---GCCTGA------AAACAAGGGGCGGC------------ 628
BSNT_02277___ 625 TTCGACAATATCTGGAAGGCGCTCAACCGCAAG-GGAAAAGCGAAGGGGG 673
||||.||.||||||||.||.||...|.| ||| ||.||.||.||.||||
BL03536___kin 629 -TCGATAAAATCTGGAACGCTCTTTTCAG-AAGAGGGAAGGCAAAAGGGG 676
BSNT_02277___ 674 AGCTGCCTGTCAAGCTTC-GTTCAGGAGTTCAAAAA----CTATTTGAAT 718
||||.|||||| .||.|| |.||||||| ||.| ||.|||||..
BL03536___kin 677 AGCTTCCTGTC-CGCCTCAGATCAGGAG----AAGACAGGCTGTTTGAGC 721
BSNT_02277___ 719 TCACGATTACATCAAACATCATCAGCGGTTTTTATATGTCCATTATGAGG 768
|.|||||.||.||.||.||..|.|..||.|||||.|||||.|||||||||
BL03536___kin 722 TGACGATAACCTCGAATATTTTAAATGGCTTTTACATGTCGATTATGAGG 771
BSNT_02277___ 769 GATATCACAGAGAAGCGGTCTATGGAGCTGCAGCTCTTTAAAAGTGAGGA 818
|||||.||.||.|||||.||.|||||....|||||.|||||.||.||.||
BL03536___kin 772 GATATTACCGAAAAGCGCTCAATGGAAAAACAGCTGTTTAAGAGCGAAGA 821
BSNT_02277___ 819 GCGCTTCAGAGAAATCTTTGAAAATGCAATGGACGCCATCATCATCTGGT 868
.|||||.||.|||.|||||||||||||.|||||.|||||||| ||||.|
BL03536___kin 822 ACGCTTTAGGGAAGTCTTTGAAAATGCGATGGATGCCATCAT--TCTGAT 869
BSNT_02277___ 869 CGAAT---GACGGAAGAATCGTAAAAGCGAATCAATCAGCCTGTAAAATT 915
|||| |||||..|.|||||.||||||||.||.||.|||||.|||||.
BL03536___kin 870 -GAATAACGACGGCCGCATCGTCAAAGCGAACCAGTCGGCCTGCAAAATC 918
BSNT_02277___ 916 TTTGAGCTGCCGATGAATTTGCTGTTGAA-AAGAAAGCTGTGTGATTTTC 964
||.||.|||||||||.|...||||.|.|| ||| |||.||..|||||||.
BL03536___kin 919 TTCGAACTGCCGATGGACCAGCTGCTCAACAAG-AAGATGACTGATTTTA 967
BSNT_02277___ 965 TCG-TTGACTCG--CAGCAGAA--ATACAGCAT---AACGAAGAGGAAAT 1006
|.| |.||..|| ||||.|.| ||.| ||| ||.|.|| |
BL03536___kin 968 TAGATCGAACCGATCAGCGGTATCATGC--CATTCAAAAGCAG------T 1009
BSNT_02277___ 1007 ACG--CAAAATACGGAGAGATCAGAGAAGAGCTGCTGTTTCAAATGGGGA 1054
||| |||| |.||.||.|||.|.|..||.||||||||||..||||..|
BL03536___kin 1010 ACGATCAAA--AAGGGGAAATCCGGGCGGAACTGCTGTTTCGTATGGCAA 1057
BSNT_02277___ 1055 ACGGGCAATTCAAAGAGCTTGAATTTACTTCAAAACGGACAATCCTTGAA 1104
||||.||||..||.||||||||.||.||.||||||||||..||..|.||.
BL03536___kin 1058 ACGGACAATATAAGGAGCTTGAGTTCACATCAAAACGGATTATGTTCGAC 1107
BSNT_02277___ 1105 AATCAGCATTTGACGATCTTAAGAAATGTAAGCGACAGAAAGCGGATGGA 1154
|..|||.|.||.||.||.||.||||||||.|||||||||||.||.|||||
BL03536___kin 1108 AGCCAGGACTTAACCATTTTGAGAAATGTCAGCGACAGAAAACGAATGGA 1157
BSNT_02277___ 1155 AAAGGAGCTTCGGGAAAGCGAGCTGAAATTCAGAAAAGTGTTCAACGGCT 1204
|.|.||..|.|||||||||||..||||.|||||||||||.||||||||.|
BL03536___kin 1158 ACAAGAATTGCGGGAAAGCGAATTGAAGTTCAGAAAAGTATTCAACGGAT 1207
BSNT_02277___ 1205 CAATGGACGGCAAT-GTGTTGTTCGACAATCAATACAGGATCATTGACGC 1253
|||||||||| ||| ||..|.|||.||||.||.|||...||.||.||.||
BL03536___kin 1208 CAATGGACGG-AATCGTTCTTTTCAACAACCAGTACGATATTATCGATGC 1256
BSNT_02277___ 1254 CAACCCGTTAGCAAGCCATATTTTGGGCCTGTCACATGAAGAGATCAAAC 1303
.|||||..|.||..|..|.|||.|..||.|..|.|.||||.||.|.|||.
BL03536___kin 1257 GAACCCCCTTGCCGGAAAAATTCTCAGCATCCCTCTTGAACAGCTGAAAA 1306
BSNT_02277___ 1304 AGCACAGCCTGTTAGATATTATTTCTGCTTATGAAATAGAAAATCTGGCA 1353
.|..||..||..|.|||.|.||.||.|..|||.|.||.|||||...|||.
BL03536___kin 1307 CGTCCAATCTTCTTGATGTCATCTCCGGCTATCACATCGAAAACGCGGCT 1356
BSNT_02277___ 1354 TCACCGGC-AAGGCAGATTAATTTTGATGAAATGGACAACGAAATTCCAT 1402
||.||.|| ||..| ||||...|||||.|||||||||||.||.||.||||
BL03536___kin 1357 TCTCCCGCTAAAAC-GATTTCCTTTGAAGAAATGGACAATGATATCCCAT 1405
BSNT_02277___ 1403 TTTTGCTGAGCAGCGGTGATAACAGAAA-----ACTCGAATTCTCATTTA 1447
|..|||||||| .|.||.||| |||.|||||.|||||||
BL03536___kin 1406 TCCTGCTGAGC--------GACCAAAAACGGATACTTGAATTTTCATTTA 1447
BSNT_02277___ 1448 AACGGAATATTATTCAAAATATGAACTTGGCTATCTTTAAAGACGTAACA 1497
|.||.||.||.||||||||||||||..||||.||..|.|.||||||.||.
BL03536___kin 1448 AGCGAAACATCATTCAAAATATGAATCTGGCGATGCTCAGAGACGTGACG 1497
BSNT_02277___ 1498 GAGCGAAAAGAATTGGAGGAACGCCTGCGCAAATCAGATACCCTTCATGT 1547
||.||||||||..|.||.||.||.||.|||||.||.||||||||.|||||
BL03536___kin 1498 GAACGAAAAGAGCTTGAAGAGCGGCTCCGCAAGTCTGATACCCTCCATGT 1547
BSNT_02277___ 1548 TGTCGGCGAACTCGCAGCCGGCATTGCTCATGAAATCAGAAATCCGATGA 1597
.|||||.||||||||||||||.|||||||||||||||.|.||.|||||||
BL03536___kin 1548 CGTCGGAGAACTCGCAGCCGGAATTGCTCATGAAATCCGCAACCCGATGA 1597
BSNT_02277___ 1598 CTGCTCTTAAAGGCTTCATTCAGCTTCTGAAAGGGAGTGTC------GAG 1641
|.||..|.|||||.||.||.|||||.||||||||.||..|| |||
BL03536___kin 1598 CGGCATTAAAAGGATTTATCCAGCTGCTGAAAGGCAGCATCCAAAATGAG 1647
BSNT_02277___ 1642 GGAGACTACGCCCTTTACTTCAACGTGATCACCTCAGAACTAAAGCGCAT 1691
||..||||.||||||||.||.||.|||||.|||||.||.||..|.||
BL03536___kin 1648 ---GATCACGCGCTTTACTTTAATGTCATCACATCAGAGCTCAAAAGGAT 1694
BSNT_02277___ 1692 CGAATCCATCATCACCGAATTCTTGATTTTAGCCAAGCCCCAGGCCATTA 1741
.||||||||.||.||.||.||..|.||..|.||.||.||.|||||.||||
BL03536___kin 1695 TGAATCCATTATTACGGAGTTTCTCATCCTTGCAAAACCGCAGGCGATTA 1744
BSNT_02277___ 1742 TGTATGAGG--AAAAACAT-GTTACCCAAATTATGAGGGACACGATAGAC 1788
|||||||.| |||||||| || |.||||.|||..||||||.||.||.
BL03536___kin 1745 TGTATGAAGAAAAAAACATCGT---CAAAATCATGCAGGACACAATGGAT 1791
BSNT_02277___ 1789 CTTCTAAATGCGCAAGCCAATCTCAGCAATGTACAAATGCAACTTGATTT 1838
||.||..|||||||.||.||.||...|||.||.||.|||||.| |||..|
BL03536___kin 1792 CTGCTGCATGCGCAGGCAAACCTTGACAACGTCCAGATGCATC-TGAAGT 1840
BSNT_02277___ 1839 ---AATTGACGACATTCCCCCGATTTACTGTGAACCGAATCAGCTGAAAC 1885
|| ||||.||||||.|.|||.|||||.||.||||||||||||||.|
BL03536___kin 1841 GCGAA--GACGGCATTCCGCTGATCTACTGCGAGCCGAATCAGCTGAAGC 1888
BSNT_02277___ 1886 AGGTTTTTATCAATATATTAAAAAACGCCATCGAAGTGATGCCTGACGGC 1935
||||.||||||||.||.||.|||||.||.||||||||.|||||.|||||.
BL03536___kin 1889 AGGTATTTATCAACATTTTGAAAAATGCGATCGAAGTAATGCCCGACGGA 1938
BSNT_02277___ 1936 GGAAATATTTTTGTAACGAT-------AAAGG-------CATTGGATCAA 1971
||.|||.|.|.|||..|||| ||||| |||
BL03536___kin 1939 GGCAATGTATATGTGTCGATCAAACCGAAAGGAGACGACCAT-------- 1980
BSNT_02277___ 1972 GATCATGTTCTTATCTC-----CTTAAAAGACGAGGGAATCGGAATGACA 2016
|||| ||.|||| || |||||.||||||||.||||||
BL03536___kin 1981 -ATCA-----TTGTCTCGCTTGCT-----GACGAAGGAATCGGCATGACA 2019
BSNT_02277___ 2017 GAAGATAAATTAAAGCGCCTTGGTGAACCGTTTTATACGACAAAGGAACG 2066
|||||.|||||.|||.|.||.||.|||||.|||||.||||||||.|||||
BL03536___kin 2020 GAAGACAAATTGAAGAGGCTCGGCGAACCTTTTTACACGACAAAAGAACG 2069
BSNT_02277___ 2067 GGGAACTGGACTTGGGCTTATGGTAAGCTATAAAATTATTGAAGAACATC 2116
|||.||||||||.|||||.|||||.||.|||||||||||||||||||||.
BL03536___kin 2070 GGGCACTGGACTCGGGCTGATGGTCAGTTATAAAATTATTGAAGAACATA 2119
BSNT_02277___ 2117 AAGGCGAAATTATGGTAGAAAGTGAAGAAGGGAAGGGCACCGTTTTCCAT 2166
||||..||||....||.||||||||||||||||..|||||....|||||.
BL03536___kin 2120 AAGGAAAAATCGAAGTTGAAAGTGAAGAAGGGAGAGGCACGACATTCCAC 2169
BSNT_02277___ 2167 ATTACGCTTCCTGTCAGACAGAATGC-TGAAGAAAGAAGG---AATGATG 2212
.|.||.||.||..||||||||.| || |||.| ||.||| ||
BL03536___kin 2170 CTGACTCTCCCGATCAGACAGCA-GCATGAGG--AGGAGGCTTAA----- 2211
BSNT_02277___ 2213 AATGA 2217
BL03536___kin 2211 ----- 2211
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