Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02290 and BL03542

See Amino acid alignment / Visit BSNT_02290 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:48
# Commandline: needle
#    -asequence dna-align/BSNT_02290___ykrZ.1.5803.seq
#    -bsequence dna-align/BL03542___mtnZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02290___ykrZ-BL03542___mtnZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02290___ykrZ-BL03542___mtnZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02290___ykrZ
# 2: BL03542___mtnZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 553
# Identity:     413/553 (74.7%)
# Similarity:   413/553 (74.7%)
# Gaps:          29/553 ( 5.2%)
# Score: 1502.0
# 
#
#=======================================

BSNT_02290___      1 ATGGCTACAATTCGAATTCATGATGAGGCAAATACAACGATTGAAAATCA     50
                     |||||.||||||||.||.||||||||...|||.||.|..||||||||.||
BL03542___mtn      1 ATGGCGACAATTCGGATCCATGATGAACAAAACACGAGCATTGAAAACCA     50

BSNT_02290___     51 AGAGGAAGTGG--CAAGCTTTCTGGACAGTCAAGAGGTTATTTATGAGCA     98
                     .||.|||||.|  |||  |||||..|..|.||.|||||.||||||||..|
BL03542___mtn     51 GGAAGAAGTAGAACAA--TTTCTAAAGCGGCAGGAGGTCATTTATGAAAA     98

BSNT_02290___     99 ATGGGATATCATGAAGCTTCCGG--------AACATCTCTCAGAGAAATA    140
                     .||||||||||..||.||.||||        ||        .||.|||||
BL03542___mtn     99 GTGGGATATCACAAAACTGCCGGCCGGTTTAAA--------GGAAAAATA    140

BSNT_02290___    141 TGACCTGACAGAAGAAGAAAAACAGCAAATTCTTGATACCTTCGAAACTG    190
                     .||..||||.||.|||||.||||||.|.|||.|.||...|||.|...|||
BL03542___mtn    141 CGATTTGACCGATGAAGAGAAACAGGAGATTTTAGACGTCTTTGCCGCTG    190

BSNT_02290___    191 AAATTAAAGATATCTCAACCCGCCGCGGCTATAAAGCACAG-GATGTTAT    239
                     ||||.|||||.||.|||...||||||||||||||||| .|| |||||.||
BL03542___mtn    191 AAATCAAAGACATTTCAGAACGCCGCGGCTATAAAGC-GAGCGATGTCAT    239

BSNT_02290___    240 TTCATTGTCAGACAGCAATCCGAAACTTGATGAACTGCTTG-AAAACTTT    288
                     .||..|.||.|||...|||||||||||.|||||.|| .||| |||||||.
BL03542___mtn    240 CTCGCTTTCCGACCAAAATCCGAAACTCGATGAGCT-TTTGAAAAACTTC    288

BSNT_02290___    289 AAA-AGAGAGCATCACCATACAGACGATGAGGTTCGTTTTATTGTAAGCG    337
                     ||| || ||||||||.||||||||||||||.||..|.|||||.||.||||
BL03542___mtn    289 AAACAG-GAGCATCATCATACAGACGATGAAGTCAGGTTTATCGTCAGCG    337

BSNT_02290___    338 GACACGGTATTTTTGTCATTCAAGGCAAGGACGGCACGTTTTTTGATGTC    387
                     |.|||||.||.||||..||..||||.||.||||||||.||||||||||||
BL03542___mtn    338 GCCACGGCATCTTTGCGATAGAAGGAAAAGACGGCACATTTTTTGATGTC    387

BSNT_02290___    388 CGTTTAAACCCTGGAGATTTAATCTCCGTGCCTGAGAATATCCGCCATTA    437
                     |.||||||.||.||.|||||.|||||.||.|||||.||.|.|||||||||
BL03542___mtn    388 CTTTTAAATCCGGGGGATTTGATCTCTGTTCCTGAAAACACCCGCCATTA    437

BSNT_02290___    438 CTTCACGCTTCAGGAGGACCGCAAAGTTGTCGCGGTGAGAATTTTTGTCA    487
                     .||||||||||||||.|||||.|||||.||.||.||.|||||.|||||.|
BL03542___mtn    438 TTTCACGCTTCAGGAAGACCGGAAAGTCGTGGCTGTCAGAATCTTTGTGA    487

BSNT_02290___    488 CAACTGAAGGCTGGGTTCCGATTTATGAAAAAGACAGCGTGAATCA---A    534
                     |.||.||.||||||||.|||||||||||||||||.|..|||||.||   |
BL03542___mtn    488 CGACAGAGGGCTGGGTGCCGATTTATGAAAAAGAGAATGTGAACCAGTCA    537

BSNT_02290___    535 TAA    537
                     |||
BL03542___mtn    538 TAA    540


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