Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02296 and BL03544

See Amino acid alignment / Visit BSNT_02296 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence dna-align/BSNT_02296___ykvE.1.5803.seq
#    -bsequence dna-align/BL03544___ykvE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02296___ykvE-BL03544___ykvE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02296___ykvE-BL03544___ykvE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02296___ykvE
# 2: BL03544___ykvE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity:     331/466 (71.0%)
# Similarity:   331/466 (71.0%)
# Gaps:          38/466 ( 8.2%)
# Score: 1134.0
# 
#
#=======================================

BSNT_02296___      1 ATG-----------ACA-GAAAAATCACTGAAGTTATTTATCGTGCTGTC     38
                     |||           ||| |||.|.||..|||||||||||||.||..|.||
BL03544___ykv      1 ATGAGTAATAGAGAACAGGAACAGTCCTTGAAGTTATTTATTGTATTATC     50

BSNT_02296___     39 GCGCGCGTATCGGTCTATTAACGATCATATGAATAAGCATATTCATAAGC     88
                     .||.|||||..|.||.|||||.||||||||||||||.|||||||||.|.|
BL03544___ykv     51 TCGAGCGTACAGATCCATTAATGATCATATGAATAAACATATTCATCATC    100

BSNT_02296___     89 ATGGGCTGAATCCGACTGAATTTGCTGTGCTAGAGCTTTTGTACCATAAA    138
                     ||||.||||||||.||.||.|||||.||..||||.||..|.||.||||||
BL03544___ykv    101 ATGGTCTGAATCCAACCGAGTTTGCCGTTTTAGAACTCCTCTATCATAAA    150

BSNT_02296___    139 GGCGATCAGCCGCTACAGCAGATAGGAGATAAAATTCTCTTGGCTAGCGG    188
                     ||.||||||||.||.|||||.|||||.|||||.|||||..||||.|||||
BL03544___ykv    151 GGGGATCAGCCCCTTCAGCAAATAGGGGATAAGATTCTTCTGGCGAGCGG    200

BSNT_02296___    189 GAGCATCACATACGTTGTAGATAAGCTGGAGCAAAAAGAACTTCTCATTC    238
                     |||.||.|||||.||.||.||.|||||.||||||||..|.||..|||  |
BL03544___ykv    201 GAGTATTACATATGTGGTTGACAAGCTTGAGCAAAAGCAGCTGATCA--C    248

BSNT_02296___    239 G-GAA-AGCGTCTCCTACAGACAGACGAGTGACATTTGCGCAAATTACTG    286
                     | ||| |||.|.|.|.||||||.|..|.|||||.|.||||||||||||.|
BL03544___ykv    249 GAGAAGAGCCTGTACGACAGACCGCAGGGTGACCTATGCGCAAATTACAG    298

BSNT_02296___    287 AAAAAGGCATCGGTCTTTTGAATGATATTTTCCCTGATCACGCTGCTGAA    336
                     |.|||||||.||..||..|..|..|.|||||.||.|.|||   |||.|||
BL03544___ykv    299 ATAAAGGCACCGAGCTCCTCGAGAAGATTTTTCCGGGTCA---TGCAGAA    345

BSNT_02296___    337 ATTGA--TG----AAATGATCAGCGTATTAAGCGAAGAAGAGGTAGAGAT    380
                        ||  ||    |.||||||||||||||||||||.||.|||  |.|||.
BL03544___ykv    346 ---GAGCTGCACAACATGATCAGCGTATTAAGCGATGAGGAG--AAAGAA    390

BSNT_02296___    381 G--TGCACCGAAATGTTAAAAAGAGTAGGATTAAACGCAAAACAGTTTCA    428
                     |  ||||.|||||||.|.||||.|||.|||.|.||.||||.|.|..||.|
BL03544___ykv    391 GCCTGCATCGAAATGCTGAAAAAAGTCGGACTGAATGCAAGAAATATTTA    440

BSNT_02296___    429 T------AATAAGTAA    438
                     |      ||..|||||
BL03544___ykv    441 TAAGGGCAAAGAGTAA    456


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