Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02332 and BL03570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence dna-align/BSNT_02332___splA.1.5803.seq
# -bsequence dna-align/BL03570___splA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02332___splA-BL03570___splA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02332___splA-BL03570___splA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02332___splA
# 2: BL03570___splA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 163/246 (66.3%)
# Similarity: 163/246 (66.3%)
# Gaps: 18/246 ( 7.3%)
# Score: 519.5
#
#
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BSNT_02332___ 1 ATGTCAA---ACCAATTTAACGCAGGAGATACTGTTTATGTGATCTACAG 47
|||.|.| |.|.|||.||....||||||...||.|||||.||.|||.|
BL03570___spl 1 ATGCCTAGGCAGCCATTCAAACTGGGAGATGAGGTGTATGTCATTTACCG 50
BSNT_02332___ 48 AAATCCGCACGCCGCCAATGTAGCTCACATAAAGGAAGCCGAAATTGTGC 97
.||||||||.||.||.|||||.||.||.|||||||||||.|||.|.||..
BL03570___spl 51 GAATCCGCATGCAGCGAATGTGGCGCATATAAAGGAAGCTGAAGTCGTTG 100
BSNT_02332___ 98 ACCATCCATACCATGAAGGCGAGCTTTCCCTGTTTATTTATGAAACCTAT 147
|.|||||....||.||||||||.||..|..|||||||.|||||.||.|||
BL03570___spl 101 ATCATCCGCTTCACGAAGGCGAACTGGCATTGTTTATGTATGATACATAT 150
BSNT_02332___ 148 CACCCGTTCGCAGAGGACGATGCTGTGTTTGCAAGCTATGAAGAAGCTAA 197
|||.|.||.||.||.||.|||||.||.|||.|....||||||||.||..|
BL03570___spl 151 CACGCCTTTGCCGAAGATGATGCCGTTTTTTCTTCATATGAAGAGGCGGA 200
BSNT_02332___ 198 ATCGCTTTACAAAGAACTCTTTGATATTGATCC---ATATGAGTAA 240
|..|||||||...|||.|.||||| | ||||||
BL03570___spl 201 ACGGCTTTACCGTGAATTATTTGA--------CGGGATATGA---- 234
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