Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02364 and BL03590
See
Amino acid alignment /
Visit
BSNT_02364 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence dna-align/BSNT_02364.1.5803.seq
# -bsequence dna-align/BL03590___ykuP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02364-BL03590___ykuP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02364-BL03590___ykuP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02364
# 2: BL03590___ykuP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 463
# Identity: 320/463 (69.1%)
# Similarity: 320/463 (69.1%)
# Gaps: 17/463 ( 3.7%)
# Score: 1003.0
#
#
#=======================================
BSNT_02364 1 -TTGGCTAAGATTTTGCTTGTTTATGCAACAATGTCAGGCAACACTGAAG 49
|.||..||| |||||||.||||||||||..|||||.||.||.||.||.|
BL03590___yku 1 ATGGGGAAAG-TTTTGCTGGTTTATGCAAGCATGTCTGGAAATACAGAGG 49
BSNT_02364 50 CAATGGCAGATTTAATTGAAAAGGGGCTTCAGGA-GGCGGAAGCAGAAGT 98
|.|||||.||||||||.||.|||||.||||..|| ||||| .||.|||||
BL03590___yku 50 CGATGGCCGATTTAATCGAGAAGGGCCTTCTTGAGGGCGG-GGCCGAAGT 98
BSNT_02364 99 AGACCGTTTCGAAGCAATGGATATTGATGATGCCCAGCTGTTTACCGATT 148
.||||||...|||||.||||||.|.||||..|| |||.||||.|||||
BL03590___yku 99 GGACCGTCATGAAGCGATGGATGTAGATGCGGC---GCTCTTTAACGATT 145
BSNT_02364 149 ATGACCATGTCATAATGGGAACCTACACGTGGGGAGACGGAGATCTGCCT 198
||.|.||..|.|||.|.||..||||.||.|||||.||||||||.||.||.
BL03590___yku 146 ATCAGCACATGATATTTGGCGCCTATACTTGGGGCGACGGAGAACTTCCG 195
BSNT_02364 199 GATGAATTTTTAGATCTTGTTGAAGACATGGAGGAGATTGATTTTTCCGG 248
|||||.|||||.|||.||...||.||.|||||.|.|||.|||||....||
BL03590___yku 196 GATGAGTTTTTGGATATTTACGACGATATGGAAGGGATGGATTTCATAGG 245
BSNT_02364 249 TAAAACATGCGCTGTATTCGGTTCTGGTGATACAGCATATGA--ATTTTT 296
.||.||.|..||.||.|||||.||.||.|||||..|.||.|| |||||
BL03590___yku 246 CAAGACGTTTGCCGTTTTCGGATCCGGAGATACTTCTTACGAGCATTTT- 294
BSNT_02364 297 CTGCGGAGCGGTTGATACGCTCGAATCAAAAATAAAAGAATGCGGTGGCG 346
|||||.||.||.||.|..||.|||...|||||.||.||...|||.||..
BL03590___yku 295 -TGCGGTGCCGTCGACATTCTTGAAGATAAAATCAAGGAGCTCGGCGGGA 343
BSNT_02364 347 ACATTGTGCTGCCTTCGGTAAAAATCGAAAATAATCCAGAAGGTGACGAA 396
||.|.|||||.||.||.||.||||||||||..|||||.||.|.|||.|||
BL03590___yku 344 ACGTGGTGCTTCCGTCCGTCAAAATCGAAATGAATCCGGAGGATGAAGAA 393
BSNT_02364 397 GAGGAAGAAT--TAATAAACTTTGGGAGACAATTCGCAAAGAAAAGCGGA 444
|| |.|.|| |..|..|.||.||.||..|.||.|||||||||.| .||
BL03590___yku 394 GA--AGGCATGCTGCTCCAATTCGGCAGGGATTTTGCAAAGAAATG-TGA 440
BSNT_02364 445 TGCGCTGTCTGA- 456
.|.||.|.|..|
BL03590___yku 441 AGTGCCGGCATAG 453
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.