Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00324 and BL03599
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:59
# Commandline: needle
# -asequence dna-align/BSNT_00324.1.5803.seq
# -bsequence dna-align/BL03599___ybbJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00324-BL03599___ybbJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00324-BL03599___ybbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00324
# 2: BL03599___ybbJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 588
# Identity: 287/588 (48.8%)
# Similarity: 287/588 (48.8%)
# Gaps: 213/588 (36.2%)
# Score: 621.5
#
#
#=======================================
BSNT_00324 1 -------------------------------ATGACTC--AAG-ACATTT 16
||.|||| ||| ||||
BL03599___ybb 1 GTGAAAAAAGGCGGATCAATAGAATTGACGCATTACTCAGAAGAACAT-- 48
BSNT_00324 17 CTTTATCCTTCTATAAGCCTGAACACTTGCCCGAGCTCCAATCATTCACG 66
|.|| ||| |.||| |||.||| ||.| |
BL03599___ybb 49 -------------TCAG-CTG--CGCTT-------CTCGAAT--TTGA-G 72
BSNT_00324 67 CTCACCAACGATGACA--AACGCTTTACCTCCCTCCCGAAAGAGGTGCTG 114
||..|..|.|| ||| |.||.||||||.|.||.|||||||
BL03599___ybb 73 CTTCCTGAAGA--ACAGCATCGATTTACCGCTCTTCCGAAAG-------- 112
BSNT_00324 115 TCTCAGGCTCTGGGCATACAGGACCGATACCCGGTT-------GTCATCT 157
|||||.| |.|..||||.||...||.||| ||.||.|
BL03599___ybb 113 ----AGGCTTT----AAAACGGACGGACGGCCAGTTTCCAATCGTAATTT 154
BSNT_00324 158 TAA---AAGACGA-CCTTCCAGTCGGTTTTTTCATTTTACATGCATC--- 200
||| |||.||| ||| |||||.|||||.||..|.|||||..|
BL03599___ybb 155 TAAGCGAAGGCGAGCCT----GTCGGATTTTTTATCCTCCATGCGACCGA 200
BSNT_00324 201 ------AAAAGAAACGCTTGCTTCCTATTCTAACAA-------TCCATTT 237
|||||| ||||||..|||| .||| |
BL03599___ybb 201 GAGGGTAAAAGA------------CTATTCGGACAACCTGGACGCCA--T 236
BSNT_00324 238 GC--TTTACTGCTCAGC--TCC-----CTGTCTTTAAACGCTGTGCATCA 278
|| ||.||.|| || ||| |.| ||| |||.||
BL03599___ybb 237 GCTGTTAACGGC---GCTATCCGGCGACAG-----AAA------GCACCA 272
BSNT_00324 279 CGGAAAAGGCTATGCGAAAAAAGCCATGCTTTTGCTTCCCGCTTTTGT-- 326
.||||||||.|.|||.|||.|||..|||||....|||||.|..|||||
BL03599___ybb 273 GGGAAAAGGTTTTGCAAAAGAAGGAATGCTCAAACTTCCAGAGTTTGTCT 322
BSNT_00324 327 -----GAGCGGATATTTT---CCATGGTGTGACGAAATCATCTTGG---- 364
||| || |||| |||.|.|||.||.|..|||
BL03599___ybb 323 CCAAGGAG--------TTCACCCAT--TGTCATGAAGTCGTGCTGGTTGT 362
BSNT_00324 365 --CCGTCAATCATCTAAACATACGC-GCAAAACACCTTTATATGAAAAGC 411
.|||.|| ||||| .||| ||..|.|||||.|||.|.|||..|
BL03599___ybb 363 GAACGTGAA------AAACA-CCGCGGCCCAGCACCTGTATGTTAAAGCC 405
BSNT_00324 412 GGGTTCCTTGATAAAGGACGGC----------GAAGAATCGGCCCGCTTG 451
||||| .|.|||| |||.||..||.|||.|.|
BL03599___ybb 406 GGGTT----------TGCCGGCACAGGGGAAAGAAAAACAGGGCCGATCG 445
BSNT_00324 452 GAGAACA------GTTGATCCTTCATCATTTCTTATAG 483
||||.|| |.||| ..||.|.|| ||..||||
BL03599___ybb 446 GAGAGCAAATCGTGATGA-AATTGAACA--TCAAATAG 480
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