Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02282 and BL03632
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence dna-align/BSNT_02282___mtnA.1.5803.seq
# -bsequence dna-align/BL03632___mtnA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02282___mtnA-BL03632___mtnA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02282___mtnA-BL03632___mtnA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02282___mtnA
# 2: BL03632___mtnA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1120
# Identity: 778/1120 (69.5%)
# Similarity: 778/1120 (69.5%)
# Gaps: 116/1120 (10.4%)
# Score: 2702.5
#
#
#=======================================
BSNT_02282___ 1 ATGACC----CATTCATTTGCTGTTCCACGTTCTGTTGAATGGAAAGAAA 46
||| || || ||||||.||.||.||||||||.||||||.||||||
BL03632___mtn 1 ATG-CCGGAACA---ATTTGCGGTGCCCCGTTCTGTCGAATGGGAAGAAA 46
BSNT_02282___ 47 CAGCTATTACCATTTTAAATCAGCAAAAGCTTCCTGATGAGACGGAATAT 96
||.|..|.|..||..|.||.||||||||||||||.||..|||||||.||.
BL03632___mtn 47 CATCGGTAAAAATCCTGAACCAGCAAAAGCTTCCCGAAAAGACGGAGTAC 96
BSNT_02282___ 97 TTGGAGCTGACGACGAAAGAGGATGTATTTGATGCGATTGTCACGCTCAA 146
.||.|.||.||.||.|||||.||..|.|.|||||||||....|||||.||
BL03632___mtn 97 CTGCATCTCACAACTAAAGAAGACATCTATGATGCGATCCAAACGCTAAA 146
BSNT_02282___ 147 AGTAAGGGGCGCTCCGGCGATCGGCATTACGGCTGCCTTCGGGCTGGCGC 196
|||.|||||.||.||.||.||||||||.||.||.||||||||.||.||.|
BL03632___mtn 147 AGTGAGGGGAGCGCCTGCCATCGGCATAACAGCCGCCTTCGGACTCGCCC 196
BSNT_02282___ 197 TTGCTGC-CA-AAAACATTGAAACAGATAATGTCACGGAATTCCG----- 239
|| ||| || |||.|||.||.|||..|.|||| |||||
BL03632___mtn 197 TT--TGCGCACAAAGCATCGATACATCTGATGT-------TTCCGCTTTT 237
BSNT_02282___ 240 -----------CCGCAGACTGGAAGACATCAAACAAT--ATTTAAACAGC 276
||||| |.|||||| .|| |.|.||.|||
BL03632___mtn 238 CTGCGGGAGCTCCGCA---------AAATCAAA-GATGAACTCAATCAG- 276
BSNT_02282___ 277 TCACGGCCTACCGCCATTAATTTGTCATGGGCGCTTGAGAGACTGAGTCA 326
.||.||||.||.|||.|.|||||.||.|||||.| |||
BL03632___mtn 277 GCAAGGCCGACAGCCGTCAATTTATCCTGGGCCC-------------TCA 313
BSNT_02282___ 327 TTCG---GTCGAAAA----------CGCGATTTCCGTAAATGAAGCAAAA 363
.||| ||..|||| |||.|..||.||.|||||.||||||
BL03632___mtn 314 ATCGGCTGTTAAAAAGCGCAGAGGGCGCAAAATCGGTCAATGAGGCAAAA 363
BSNT_02282___ 364 ACAAACCTTGTCCATGAAGCCATTCAGATTCAGGTCGAGGATGAGGAAAC 413
||||||||.|||||.|||||.||||||||.|||||.||.||.||.|||||
BL03632___mtn 364 ACAAACCTCGTCCACGAAGCGATTCAGATCCAGGTTGAAGACGAAGAAAC 413
BSNT_02282___ 414 GTGCCGGTTGATCGGCCAAAACGCCCTGCAGCTTTTCAAAAAAGGCGACA 463
.||||||..||||||.||.||.||.|||||..|.||||||...|||||||
BL03632___mtn 414 ATGCCGGCAGATCGGACAGAATGCTCTGCATTTGTTCAAATCGGGCGACA 463
BSNT_02282___ 464 GGATCATGACAATCTGCAATGCCGGCTCAATCGCGACAAGCCGCTATGGA 513
|.||||||||.||||||||.||||||||.||||||||||||.|.||.|||
BL03632___mtn 464 GCATCATGACCATCTGCAACGCCGGCTCGATCGCGACAAGCAGGTACGGA 513
BSNT_02282___ 514 ACGGCGCTAGCTCCGTTTTACTTGGCCAAACAAAAAGATTTGGGATTGCA 563
|||||.||..|.|||||||||.|.||||||..|||.|||.|.|...|.||
BL03632___mtn 514 ACGGCCCTTTCCCCGTTTTACCTTGCCAAAACAAAGGATCTCGACCTTCA 563
BSNT_02282___ 564 CATTTATGCCTGTGAAACAAGGCCTGTCCTGCAAGGTTCACGCCTTACTG 613
.|||||.||||||||||||||||||||.||.||.||..|.|||||.||.|
BL03632___mtn 564 TATTTACGCCTGTGAAACAAGGCCTGTTCTTCAGGGGGCGCGCCTGACGG 613
BSNT_02282___ 614 CTTGGGAGCTGATGCAGGGGGGCATTGATGTCACTCTGATCACAGACAGC 663
|.||||||||.|||||||||||.|||||.||.||.|||||.|||||||||
BL03632___mtn 614 CGTGGGAGCTTATGCAGGGGGGGATTGACGTGACGCTGATTACAGACAGC 663
BSNT_02282___ 664 ATGGCCGCCCATACGATGAAGGAAAAACAAATTTCCGCTGTTATCGTCGG 713
|||||.||||||||||||||||||||..|.|||||.||.||.||.|||||
BL03632___mtn 664 ATGGCTGCCCATACGATGAAGGAAAAGAACATTTCAGCCGTCATTGTCGG 713
BSNT_02282___ 714 AGCCGACCGAATTGCAAAGAACGGTGATACGGCAAATAAAATCGGCACAT 763
|||.|||.|.||.||||..|||||.|||||.||.|||||||||||.||.|
BL03632___mtn 714 AGCGGACAGGATCGCAAGAAACGGAGATACAGCCAATAAAATCGGAACGT 763
BSNT_02282___ 764 ACGGTCTT-GCTGTTTTAGCAAACGCCTTTGATATTCCGTTTTTTGTCGC 812
.||| ||| ||..|..|.||.||.||||||.|.||.|||||||||.||||
BL03632___mtn 764 TCGG-CTTGGCAATCCTCGCCAAAGCCTTTCAAATCCCGTTTTTTATCGC 812
BSNT_02282___ 813 CGCACCTTTATCTACATTTGATACAAAGGTC------AAATGCGGCGCTG 856
.||.||..|.||.||.|||||| ||| ..||||||||..|
BL03632___mtn 813 TGCTCCCCTGTCAACTTTTGAT------GTCTCGATTTCATGCGGCGACG 856
BSNT_02282___ 857 ATATCCCGATAGAGGAACGGGATCCCGAGGAAGTCAGGCAGATTTCCGGA 906
|.||.|||||.||.|||||.|||||.||.||||||||.|.|||...||||
BL03632___mtn 857 ACATTCCGATTGAAGAACGCGATCCGGATGAAGTCAGACGGATAAACGGA 906
BSNT_02282___ 907 GTTCGGAC--------CGCTCCATCCA-ATGTGCCTGTCTTTAATCCCGC 947
|| |||..|| | |.||||||||.||.|||||.||
BL03632___mtn 907 ------ACGCAAATAGCGCCGCA---AGAGGTGCCTGTGTTCAATCCTGC 947
BSNT_02282___ 948 TTTCGACATTACACCTCATGATCTCATTTCAGGAATCATCACAGAAAAAG 997
|||.||.||.||.||.||.|||.|.||.||.|||||||||||.|||||||
BL03632___mtn 948 TTTTGATATCACGCCGCACGATTTAATCTCTGGAATCATCACGGAAAAAG 997
BSNT_02282___ 998 GGATTATGACCGGAAACTATGAAGAAGAGATTGAACAGCTGTTTAGAGGA 1047
|||||||.||.|..|..|.|||||||||.||.|||..|||||||...|..
BL03632___mtn 998 GGATTATCACAGATAGATTTGAAGAAGAAATCGAAGCGCTGTTTTCCGCT 1047
BSNT_02282___ 1048 GAAAAGGTGCATTAA----- 1062
||| ||..|.|
BL03632___mtn 1048 GAA-----GCCCTTACTTAG 1062
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