Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02311 and BL03644

See Amino acid alignment / Visit BSNT_02311 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence dna-align/BSNT_02311.1.5803.seq
#    -bsequence dna-align/BL03644___ykvS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02311-BL03644___ykvS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02311-BL03644___ykvS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02311
# 2: BL03644___ykvS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 190
# Identity:     146/190 (76.8%)
# Similarity:   146/190 (76.8%)
# Gaps:           5/190 ( 2.6%)
# Score: 543.0
# 
#
#=======================================

BSNT_02311         1 GTGAAAATCGCTAAGGTTGGGAATGTCATTGAATTTAAAAACGGATTAAC     50
                     .|||||||.||.||.||.|||||.|||||.|||||||||||||||.|.||
BL03644___ykv      1 TTGAAAATTGCAAAAGTCGGGAACGTCATCGAATTTAAAAACGGACTCAC     50

BSNT_02311        51 CGGTGTTGTTGAAAAAGTAAATGAGAATTCTGTTATCGTTGATGTGACGA    100
                     |||..|.||.|||||||||||.||.||.|||||.|||||.|||||.||||
BL03644___ykv     51 CGGAATCGTAGAAAAAGTAAACGAAAACTCTGTGATCGTCGATGTCACGA    100

BSNT_02311       101 TCATGGATAACTATCGGGATCTT-GAGTTAGATTCATTGACAGTTGTTAA    149
                     |.|||||.|||||..|.|| ||| ||..|.||.||.||.||.||.||.||
BL03644___ykv    101 TTATGGAAAACTACAGAGA-CTTGGAACTGGACTCCTTAACCGTCGTCAA    149

BSNT_02311       150 TCATAAAAATTATAAGATCATCAGAGACTCC---TATTAA    186
                     |||||||||.|||||.||.||.|.|||||||   .|||||
BL03644___ykv    150 TCATAAAAACTATAAAATTATTAAAGACTCCCTGCATTAA    189


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