Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02743 and BL03655
See
Amino acid alignment /
Visit
BSNT_02743 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence dna-align/BSNT_02743___ymdA.1.5803.seq
# -bsequence dna-align/BL03655___ymdA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02743___ymdA-BL03655___ymdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02743___ymdA-BL03655___ymdA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02743___ymdA
# 2: BL03655___ymdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1563
# Identity: 1307/1563 (83.6%)
# Similarity: 1307/1563 (83.6%)
# Gaps: 3/1563 ( 0.2%)
# Score: 5502.5
#
#
#=======================================
BSNT_02743___ 1 ATGACCCCAATTATGATGGTTCTCATCTCCATTTTGCTGATTCTACTCGG 50
||||..|| .|||..| .|||||||||||||||||||||..|||.||.|
BL03655___ymd 1 ATGAGTCC-TTTAGCA--ATTCTCATCTCCATTTTGCTGAGCCTATTCTG 47
BSNT_02743___ 51 TTTAGTTGTTGGCTACTTTGTTCGTAAAACCATTGCCGAAGCGAAAATTG 100
|||||||||||||||||.|||||||||||.||||||||||||.||||||.
BL03655___ymd 48 TTTAGTTGTTGGCTACTATGTTCGTAAAATCATTGCCGAAGCAAAAATTT 97
BSNT_02743___ 101 CGGGCGCACGCGGTGCAGCCGAGCAAATTCTTGAAGATGCGAAGCGTGAT 150
|.||.||.||...|||||||||.||||||||||.|||.||.|||||.|||
BL03655___ymd 98 CAGGTGCGCGAAATGCAGCCGAACAAATTCTTGGAGACGCAAAGCGGGAT 147
BSNT_02743___ 151 GCTGAAGCACTGAAAAAAGAAGCTCTGCTTGAAGCAAAGGATGAAATCCA 200
||||||||..|||||||||||||.||.||||||||||||||.||.||.||
BL03655___ymd 148 GCTGAAGCGTTGAAAAAAGAAGCCCTTCTTGAAGCAAAGGACGAGATTCA 197
BSNT_02743___ 201 CAAACTTCGAATAGATGCTGAACAGGAAGTTCGTGAAAGACGAAATGAGC 250
.|..|||||.|||||.||||||||.|||||||||||||||||||||||||
BL03655___ymd 198 TACGCTTCGGATAGAAGCTGAACAAGAAGTTCGTGAAAGACGAAATGAGC 247
BSNT_02743___ 251 TTCAAAAACAAGAAAACCGTTTACTCCAAAAGGAGGAAAACCTTGATCGC 300
|||||||||||||||||||||||||.||||||||.||.||||||||.||.
BL03655___ymd 248 TTCAAAAACAAGAAAACCGTTTACTTCAAAAGGAAGAGAACCTTGACCGA 297
BSNT_02743___ 301 AAACATGAGGGAATTGATAAACGGGAAGCGATGTTGGAGAAGAAAGATCA 350
|||.||||...|.|.|||||||||||||||||||||||||||||||||||
BL03655___ymd 298 AAAGATGAATCATTAGATAAACGGGAAGCGATGTTGGAGAAGAAAGATCA 347
BSNT_02743___ 351 TTCTCTGAATGAACGACAACAACATATTGAAGAGATGGAAAGCAAAGTGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03655___ymd 348 TTCTCTGAATGAACGACAACAACATATTGAAGAGATGGAAAGCAAAGTGG 397
BSNT_02743___ 401 ATGAGATGATTCGTATGCAGCAGTCTGAGTTGGAACGAATTTCGAGTCTA 450
||||.||||||||||||||||||||.||||||||.||.|||||.|||||.
BL03655___ymd 398 ATGAAATGATTCGTATGCAGCAGTCAGAGTTGGAGCGTATTTCAAGTCTG 447
BSNT_02743___ 451 ACTCGTGACGAAGCGAAACAAATCATTCTTGAGCGGGTTGAAAACGAGCT 500
||.||.||.||||||||.|||||||||||.||.|||||||||||||||||
BL03655___ymd 448 ACGCGAGATGAAGCGAAGCAAATCATTCTGGAACGGGTTGAAAACGAGCT 497
BSNT_02743___ 501 TTCACATGACATCGCCATCATGACAAAAGAAACTGAAAACCGTGCGAAAG 550
|||.|||||||||||.|||||||..|||||||.||||||.||.|||||||
BL03655___ymd 498 TTCCCATGACATCGCGATCATGATGAAAGAAAGTGAAAATCGAGCGAAAG 547
BSNT_02743___ 551 AAGAGGCGGATAAGAAAGCGAAAAACATTCTTTCACTCGCCTTACAGCGC 600
|||||||.|||||.||.||||||||.|||||||||.|.||.|||||||||
BL03655___ymd 548 AAGAGGCTGATAAAAAGGCGAAAAATATTCTTTCATTGGCTTTACAGCGC 597
BSNT_02743___ 601 TGCGCAGCGGACCACGTTGCCGAAACAACGGTATCAGTTGTCAATCTTCC 650
||.||.||.||.||.||.|||||.||||||||.|||||||||||.|||||
BL03655___ymd 598 TGTGCGGCAGATCATGTGGCCGAGACAACGGTTTCAGTTGTCAACCTTCC 647
BSNT_02743___ 651 AAATGATGAGATGAAAGGACGTATCATCGGACGGGAAGGGCGTAACATTC 700
||||||||||||||||||.||.||.||||||||.|||||.|||||.||.|
BL03655___ymd 648 AAATGATGAGATGAAAGGCCGCATTATCGGACGTGAAGGACGTAATATCC 697
BSNT_02743___ 701 GTACGCTTGAAACGCTGACAGGAATTGACCTGATTATTGATGATACGCCT 750
||||..|.|||||..||||.||.||.||.|||||.||.||.||||||||.
BL03655___ymd 698 GTACATTGGAAACATTGACGGGGATCGATCTGATCATCGACGATACGCCG 747
BSNT_02743___ 751 GAAGCTGTCATTCTTTCCGGATTTGATCCGATCAGACGTGAGACAGCCAG 800
|||||.||.||.|||||.|||||||||||||||||.|||||.||||||||
BL03655___ymd 748 GAAGCCGTTATCCTTTCAGGATTTGATCCGATCAGGCGTGAAACAGCCAG 797
BSNT_02743___ 801 AATTGCTCTTGATAAACTCGTTCAGGATGGCCGTATTCATCCGGCACGGA 850
.||.|||||||||||||||||||||||||||||.||||||||.||..|.|
BL03655___ymd 798 GATCGCTCTTGATAAACTCGTTCAGGATGGCCGCATTCATCCTGCCAGAA 847
BSNT_02743___ 851 TTGAAGAAATGGTTGAAAAATCTCGCCGCGAGGTCGATGACTATATTCGT 900
|.||||||||||||||.|||||.|||||.||.||.|||||.||.||.||.
BL03655___ymd 848 TCGAAGAAATGGTTGAGAAATCCCGCCGTGAAGTGGATGATTACATCCGC 897
BSNT_02743___ 901 GAGATGGGTGAGCAAACGACATTTGAGGTTGGCGTTCATGGCCTCCACCC 950
||.||||||||.||.|||||.|||||.|||||.|||||.||.||.||.||
BL03655___ymd 898 GAAATGGGTGAACAGACGACGTTTGAAGTTGGAGTTCACGGTCTTCATCC 947
BSNT_02743___ 951 AGATCTCATCAAGATCCTCGGCCGCTTAAAGTTCCGTACAAGCTACGGTC 1000
.|||.|.|||||.||||||||||||||.||||||.|.||.||||||||.|
BL03655___ymd 948 CGATTTAATCAAAATCCTCGGCCGCTTGAAGTTCAGAACGAGCTACGGAC 997
BSNT_02743___ 1001 AAAATGTGCTTAAGCATTCCATGGAAGTCGCATTCTTGGCCGGTCTAATG 1050
|.|||||.||.||.|||||.||||||||.||.||..||.|.||..|.|||
BL03655___ymd 998 AGAATGTACTGAAACATTCAATGGAAGTGGCGTTTCTGACAGGCTTGATG 1047
BSNT_02743___ 1051 GCATCGGAGCTTGGTGAAGACGCAAAGCTTGCTAAACGTGCGGGTCTTCT 1100
||.||.|||||.||.|||||||.||.|||.||.|||.|.||.||.|||||
BL03655___ymd 1048 GCTTCAGAGCTCGGAGAAGACGTAACGCTCGCAAAAAGGGCAGGACTTCT 1097
BSNT_02743___ 1101 TCACGACATCGGGAAAGCAATTGACCATGAAGTAGAAGGAAGCCACGTTG 1150
|||.||.|||||||||||.|||||||||||.||.||||||||||||||||
BL03655___ymd 1098 TCATGATATCGGGAAAGCGATTGACCATGAGGTGGAAGGAAGCCACGTTG 1147
BSNT_02743___ 1151 AGATCGGGGTAGAGCTTGCGACCAAATATAAAGAGCACCCAGTCGTGATT 1200
|.|||||.||.||.||.||.|||||.|||||||||||.|||||.||.||.
BL03655___ymd 1148 AAATCGGTGTGGAACTGGCCACCAAGTATAAAGAGCATCCAGTTGTCATC 1197
BSNT_02743___ 1201 AACAGTATTGCATCACACCACGGGGACGAGGAGCCGACTTCCATTATTGC 1250
||||||||.|||||.||||||||.||..||||||||||||||||.||.||
BL03655___ymd 1198 AACAGTATCGCATCTCACCACGGAGATCAGGAGCCGACTTCCATCATCGC 1247
BSNT_02743___ 1251 TGTGCTGGTAGCTGCAGCAGATGCGCTTTCCGCTGCAAGACCTGGCGCAA 1300
.|||||.||.||.|||||.||||||||.||.||.||||||||.|||||||
BL03655___ymd 1248 CGTGCTCGTGGCCGCAGCCGATGCGCTGTCTGCCGCAAGACCAGGCGCAA 1297
BSNT_02743___ 1301 GAAGTGAGACGCTCGAGAATTATATTCGAAGACTTGAAAAACTCGAAGAA 1350
||||.||.||||||||.||.||||||||.||.|||||||||||.||||||
BL03655___ymd 1298 GAAGCGAAACGCTCGAAAACTATATTCGCAGGCTTGAAAAACTGGAAGAA 1347
BSNT_02743___ 1351 ATTTCTGAGTCCTACGAAGGTGTTGAAAAATCATTTGCCATTCAGGCTGG 1400
||.||.||.||.|||||||||||||||||||||||.||.||.||.||.||
BL03655___ymd 1348 ATCTCCGAATCATACGAAGGTGTTGAAAAATCATTCGCGATACAAGCGGG 1397
BSNT_02743___ 1401 ACGCGAAGTGCGTATTATGGTGAAGCCGGATTCAATTAATGATCTTGAGG 1450
|||.||.|||||.||.|||||.||.||.||.|||||.|||||||||||.|
BL03655___ymd 1398 ACGAGAGGTGCGGATCATGGTCAAACCTGACTCAATCAATGATCTTGAAG 1447
BSNT_02743___ 1451 CTCATCGACTGGCGCGAGATATCCGCAAGCGAATTGAGGACGAGCTCGAT 1500
|.|||||..|||||||.|||||.||.||.|||||||||||||||||.||.
BL03655___ymd 1448 CCCATCGTTTGGCGCGTGATATTCGAAAACGAATTGAGGACGAGCTTGAC 1497
BSNT_02743___ 1501 TATCCAGGTCATATTAAGGTGACAGTAATCAGAGAGACTCGAGCCGTAGA 1550
||.||.||.||.||.|||||.||.||||||||.||.||..|||||||.||
BL03655___ymd 1498 TACCCTGGACACATCAAGGTAACCGTAATCAGGGAAACGAGAGCCGTTGA 1547
BSNT_02743___ 1551 GTATGCAAAATAA 1563
.||.|||||||||
BL03655___ymd 1548 ATACGCAAAATAA 1560
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.