Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02751 and BL03661

See Amino acid alignment / Visit BSNT_02751 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:31
# Commandline: needle
#    -asequence dna-align/BSNT_02751___ymcA.1.5803.seq
#    -bsequence dna-align/BL03661___ymcA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02751___ymcA-BL03661___ymcA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02751___ymcA-BL03661___ymcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02751___ymcA
# 2: BL03661___ymcA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity:     343/438 (78.3%)
# Similarity:   343/438 (78.3%)
# Gaps:          12/438 ( 2.7%)
# Score: 1320.0
# 
#
#=======================================

BSNT_02751___      1 ATGACGCTCTACTCAAAAAAAGACATTG-TGCAGCAGGCACGAAACCTTG     49
                     .|||||||.||..|.||||||||.|||| |||| .|.||.||..|.||.|
BL03661___ymc      1 GTGACGCTTTATACGAAAAAAGAGATTGTTGCA-AAAGCGCGGGAGCTCG     49

BSNT_02751___     50 CAAAAATGATTTCTGAAACAGAAGAGGTTGATTTTTTCAAACGGGCTGAA     99
                     |||||||||||.|.|||||.|||||.||.||.|||||||||...||.||.
BL03661___ymc     50 CAAAAATGATTGCAGAAACGGAAGAAGTCGACTTTTTCAAAAAAGCGGAG     99

BSNT_02751___    100 GCGCAAATCAATGAGAATGACAAAGT---GTCCACAATCGTTAATCAGAT    146
                     ||.||.||.||||||||||.||||.|   |..||.||||   ||.||.||
BL03661___ymc    100 GCACAGATTAATGAGAATGCCAAAATAACGGGCATAATC---AACCAAAT    146

BSNT_02751___    147 TAAAGCCCTGCAAAAGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATG    196
                     .|||||||||||||||||.||.|||||..|.||.|||||.||||||||.|
BL03661___ymc    147 CAAAGCCCTGCAAAAGCAAGCCGTCAACTTTAAACATTACGAAAAGCACG    196

BSNT_02751___    197 AAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAAGAGCTT    246
                     |||||||.||||||...||||||||.|||||||||||.||.|||||||||
BL03661___ymc    197 AAGCGCTTAAACAAACGGAAGCAAAGATTGACGCGCTTCAGGAAGAGCTT    246

BSNT_02751___    247 GAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAA    296
                     ||.||||||||..|.||.||.||.|||||||||||.||.||||||||.||
BL03661___ymc    247 GACGAGATTCCGATCATTCAAGAGTTCAGAGACTCCCAAATGGAAGTCAA    296

BSNT_02751___    297 TGACCTACTGCAGCTCGTTGCACACACCATTTCCAACCAAGTCACAAATG    346
                     .|||||.||.|||||.||.||.||.||.||.||.||||||||.|||||.|
BL03661___ymc    297 CGACCTTCTTCAGCTTGTCGCGCATACAATATCAAACCAAGTGACAAACG    346

BSNT_02751___    347 AAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCA    396
                     |.|||||||||||.|||||.||.||||||||||||||.||.|||||||||
BL03661___ymc    347 AGATCATCACATCGACCGGGGGAGACCTGCTGAAAGGCGAGACCGGTTCA    396

BSNT_02751___    397 AAGGTGAAGCATTCAAATAAC--AGCTGTTCTCTCTAA    432
                     ||.|||||..||||  ||.||  |||||||||||.|||
BL03661___ymc    397 AAAGTGAAAAATTC--ATCACCGAGCTGTTCTCTATAA    432


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