Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02755 and BL03664

See Amino acid alignment / Visit BSNT_02755 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:32
# Commandline: needle
#    -asequence dna-align/BSNT_02755___mutL.1.5803.seq
#    -bsequence dna-align/BL03664___mutL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02755___mutL-BL03664___mutL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02755___mutL-BL03664___mutL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02755___mutL
# 2: BL03664___mutL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2012
# Identity:    1410/2012 (70.1%)
# Similarity:  1410/2012 (70.1%)
# Gaps:         223/2012 (11.1%)
# Score: 4960.0
# 
#
#=======================================

BSNT_02755___      1 ATGAATGTGGCAAAAGTCATCCAGCTGTCAGATGAGCTTTCAAATAAAAT     50
                           .||||||||.|..|.||||||.|.||.||..|.||.||||||||
BL03664___mut      1 ------TTGGCAAAAATTGTTCAGCTGCCTGACGATTTATCGAATAAAAT     44

BSNT_02755___     51 AGCGGCGGGCGAGGTTGTGGAACGGCCCGCCTCAGTCGTCAAAGAATTGG    100
                     .||||||||.||.||.||||||.||||.||.||.|||||||||||..|.|
BL03664___mut     45 CGCGGCGGGTGAAGTAGTGGAAAGGCCGGCGTCGGTCGTCAAAGAGCTTG     94

BSNT_02755___    101 TGGAAAATGCGATCGACGCTGACAGCACAGTCATTGAAATCGATATTGAG    150
                     |.||||||||.|||||.||..|||||.|.||.||||||||||||.||||.
BL03664___mut     95 TCGAAAATGCAATCGATGCGAACAGCTCCGTGATTGAAATCGATGTTGAA    144

BSNT_02755___    151 GAAGCAGGCCTTGCATCCATTCGGGT-CTTGGATAACGGCGAAGGAATGG    199
                     |||||.||.||.||.||.|||...|| ||| ||..||||||||||.||||
BL03664___mut    145 GAAGCGGGTCTCGCCTCGATTAAAGTGCTT-GACGACGGCGAAGGGATGG    193

BSNT_02755___    200 A-GAATGAAGATTGCA-AGCGAGCTTTCCGCCGCCACGCAACGAGTAAAA    247
                     | |.| |||||.|||| |.|| |||||....||.||.||.||.||.||||
BL03664___mut    194 ACGCA-GAAGACTGCAGAACG-GCTTTTTTGCGTCATGCCACAAGCAAAA    241

BSNT_02755___    248 TAAAAGATGAAAATGATTTATTCAGGGTGAGAACGCTCGG-TTTCAGGGG    296
                     |.|||||.|||||.||..|.||..|.||.||||||||||| |||| |.||
BL03664___mut    242 TCAAAGACGAAAACGACCTGTTTCGCGTCAGAACGCTCGGATTTC-GCGG    290

BSNT_02755___    297 AGAAGCCCTGCCGAGTATCGCGTCAGTCTCTCATCTGGAG-ATTACAACA    345
                     ||||||..||||.|||||||||||.|||||.|| ||..|| ||||.|||.
BL03664___mut    291 AGAAGCTTTGCCAAGTATCGCGTCTGTCTCACA-CTTAAGCATTAAAACG    339

BSNT_02755___    346 AGCACTGGTGAAGGAGCTGGGAC------GAAGCTCGTCCTCCAAGGAGG    389
                     |||||.||.|||||.||.||.||      ||.|      ||.||.||.||
BL03664___mut    340 AGCACCGGAGAAGGGGCAGGCACCCATTTGACG------CTGCAGGGGGG    383

BSNT_02755___    390 AAACATCATTTCCG------AATCGCGTTCCTCAAGCAGGAAGGGAACTG    433
                     ||..||||||||||      ||.|||      |||||.|.|..|||||.|
BL03664___mut    384 AAGAATCATTTCCGAGCAAAAAGCGC------CAAGCCGCAGAGGAACCG    427

BSNT_02755___    434 AAATTGTCGTTTCCAACCTGTTTTTTAACACACCGGCCCGTTTGAAATAT    483
                     |||||...|||.|||||||||||||.||.||.|||||..|..|||||||.
BL03664___mut    428 AAATTACGGTTACCAACCTGTTTTTCAATACGCCGGCAAGGCTGAAATAC    477

BSNT_02755___    484 ATGAAAACCGTTCATACAGAGCTTGGAAACATTACAGACGTGGTTAACCG    533
                     ||||||||..|||||||.||||||||.|||||.|||||.|||||.|||.|
BL03664___mut    478 ATGAAAACGATTCATACCGAGCTTGGCAACATCACAGATGTGGTCAACAG    527

BSNT_02755___    534 TATTGCTCTGGCGCATCCAGAGGTATCGATCCGCCTGCGACATCATGGGA    583
                     .||.||.||.||.|||||.||.||.||||||.|.|||||.|||||.||||
BL03664___mut    528 AATCGCCCTTGCCCATCCGGAAGTTTCGATCAGGCTGCGTCATCAAGGGA    577

BSNT_02755___    584 AAAACCTGCTTCAAACGAACGGAAACGGAGATGTGCGCCATGTACTGGCA    633
                     |||..||.||.||.||.|||||||||||.|||||.|||||.||.||.||.
BL03664___mut    578 AAACGCTTCTGCAGACAAACGGAAACGGCGATGTCCGCCACGTGCTTGCG    627

BSNT_02755___    634 GCGATTTACGGCACGGCTGTCGCCAAAAAAATGCTTCCGCTGCATGCGAG    683
                     |||||||||||||||||.||.||||||||||||||.|||||..|.|||||
BL03664___mut    628 GCGATTTACGGCACGGCGGTTGCCAAAAAAATGCTCCCGCTTGAAGCGAG    677

BSNT_02755___    684 CTC-CTTGGATTTTGAAGTAAAGGGATATATCGCCCTCCCAGAGATTACA    732
                     .|| ||| ||.||||||||.|||||.||||||||.||.||.||.|||||.
BL03664___mut    678 ATCTCTT-GACTTTGAAGTGAAGGGCTATATCGCTCTTCCTGAAATTACG    726

BSNT_02755___    733 CGGGCGTCGAGAAACTATATGTCGTCTGTGGTCAATGGCCGTTACATTAA    782
                     ||.||.|||.||||.||.|||||.|||||.|||||.|||.|.||||||||
BL03664___mut    727 CGCGCCTCGCGAAATTACATGTCATCTGTCGTCAACGGCAGATACATTAA    776

BSNT_02755___    783 AAATTTCCCGCTCGTCAAAGCGGTTCATGAAGGCTATCATACGCTTCTGC    832
                     |||.|||||||||||.||||||.|.||.||.|||||.|||||||||||.|
BL03664___mut    777 AAACTTCCCGCTCGTAAAAGCGATCCACGAGGGCTACCATACGCTTCTTC    826

BSNT_02755___    833 CGATCGGACGCCATCCGATTACTTTTATAGAAATTACGATGGACCCGATT    882
                     |||||||.|||||||||||.||.||.||.|||||.|..|||||||||.|.
BL03664___mut    827 CGATCGGCCGCCATCCGATCACGTTCATTGAAATCAACATGGACCCGCTC    876

BSNT_02755___    883 TTAGTCGATGTCAATGTGCATCCATCGAAGCTTGAGGTCCGGCTCAGCAA    932
                     .|.||.||.|||||.|||||.||.||.|||||.||||||.||||.|||||
BL03664___mut    877 CTTGTGGACGTCAACGTGCACCCGTCAAAGCTGGAGGTCAGGCTGAGCAA    926

BSNT_02755___    933 GGAAACAGAGCTTCATGACTTAATTCGTGACGGAATTAAAGATGTATTTA    982
                     .||.||.||||||||.||..|.|||||.||||..||.|||||.||.||||
BL03664___mut    927 AGAGACGGAGCTTCACGAGCTGATTCGCGACGCCATCAAAGACGTCTTTA    976

BSNT_02755___    983 AACAGCAGCAGCTGATTCCGAGTGCCCAGCTTCCGAAAAAATCGGCACCT   1032
                     |||||||||||||.|||||.||.|..|||.|.|||||||||.|.||||||
BL03664___mut    977 AACAGCAGCAGCTCATTCCAAGCGTGCAGGTCCCGAAAAAAACCGCACCT   1026

BSNT_02755___   1033 GTTATCAAAAA---TGAGCAACA-------------------GTTC-ATA   1059
                     .|.|||||.||   .|||||.||                   ||.| |.|
BL03664___mut   1027 CTGATCAATAAACCAGAGCAGCAAAAGCTTGATTTCGACCAGGTACGAGA   1076

BSNT_02755___   1060 ACC----------TTTGATGAAAAGCCTCCG-----GAAAGAAAAGTA--   1092
                     |||          |.||||        ||.|     ||||| |.||||  
BL03664___mut   1077 ACCGGCACCTCTTTCTGAT--------TCTGATGTTGAAAG-AGAGTATA   1117

BSNT_02755___   1093 --CCGGAAAAAGCGCATGCGCCATCTTATTCACCAATGAAGCTCAGCTCA   1140
                       |||||            |||.||.|.|||..|.|||||..|.|||||.
BL03664___mut   1118 AGCCGGA------------GCCTTCGTTTTCGGCGATGAAATTAAGCTCG   1155

BSNT_02755___   1141 GTCGTGAAAGAGCCGATTGATGCGGAGGAAGAATTGCCTCCTCTCCAATT   1190
                     .|.||.|||||.||                     |||.||| |||    
BL03664___mut   1156 CTTGTCAAAGACCC---------------------GCCGCCT-TCC----   1179

BSNT_02755___   1191 TGATGCTCCATCTATCGTTGATCAGGAACAAACCCT--TG-AGGTGTCCG   1237
                         |||||      |||.||.|..|||.|||.|.|  || |||...|||
BL03664___mut   1180 ----GCTCC------CGTAGAGCGCGAAGAAAACGTAATGCAGGACACCG   1219

BSNT_02755___   1238 A---TGTTT---------CAGAAGA----ACTGCCTGAA-----------   1260
                     |   ||..|         |.|||||    || |||||||           
BL03664___mut   1220 AGCCTGAATGGCCCGGAGCTGAAGAGTATAC-GCCTGAAGCCGCGCCGGC   1268

BSNT_02755___   1261 ---ACATTTGAGCAGGAATGCCATGAGGAACA-GCAGCAGCCAGCGTC--   1304
                        |||    |||||.|   ||    |||||| ||||.||..|.||||  
BL03664___mut   1269 CGTACA----AGCAGAA---CC----GGAACAGGCAGGAGAGAACGTCCA   1307

BSNT_02755___   1305 ------------------TGAGCGGGTTCCGATTATGTACCCGATCGGCC   1336
                                       .||..||||.|||||.|||||.||||||||||
BL03664___mut   1308 GGACGAAGAGACGCCAAAAGAAAGGGTGCCGATCATGTATCCGATCGGCC   1357

BSNT_02755___   1337 AGATGCACGGGACTTATATATTGGCACAAAACGAAAACGGCCTGTATATT   1386
                     |.||||||||.||.||.|||.|.||.|||||.||||||||.|||||.||.
BL03664___mut   1358 AAATGCACGGCACCTACATACTTGCCCAAAATGAAAACGGGCTGTACATC   1407

BSNT_02755___   1387 ATCGACCAGCACGCCGCCCAAGAACGTATTAAATATGAGTACTTTCGTGA   1436
                     |||||.|||||||||||.||.||.||.||.|||||.||.||.||.|||||
BL03664___mut   1408 ATCGATCAGCACGCCGCACAGGAGCGGATCAAATACGAATATTTCCGTGA   1457

BSNT_02755___   1437 AAAGGTGGGGGAGGTTGAGCCTGAAGTGCAGGATATGATTGTACCGCTGA   1486
                     |||.||.|||||.||.||..|.|||||.|||||..||.||||.|||||||
BL03664___mut   1458 AAAAGTCGGGGAAGTCGAATCGGAAGTCCAGGACCTGCTTGTGCCGCTGA   1507

BSNT_02755___   1487 CGTTCCACTACTCCACAAATGAGGCTTTGATTATTGAACAGCACAAACAA   1536
                     |.|||||.||.||.|.||||||.||..|||..||.||.||||||....|.
BL03664___mut   1508 CATTCCATTATTCAAAAAATGAAGCGCTGACGATCGACCAGCACTTGGAC   1557

BSNT_02755___   1537 GAGCT--CGAAAGCGTCGGTGTCTTTTTAGAGTCATTCGGCTCTAACAGT   1584
                     ||..|  |.|||  |||||.||||||.|.||.||.||||||.|...|||.
BL03664___mut   1558 GATTTAGCCAAA--GTCGGCGTCTTTCTCGAATCGTTCGGCGCCGGCAGC   1605

BSNT_02755___   1585 TACATCGTCCGCTGCCACCCGGCCTGGTTTCC-AAAGGGAGAAGAAGCAG   1633
                     ||.||||||||.|||||||||.|.|||||||| |||||| ||||||.| |
BL03664___mut   1606 TATATCGTCCGATGCCACCCGACATGGTTTCCGAAAGGG-GAAGAAAC-G   1653

BSNT_02755___   1634 A-GCTTATAGAAGAAATCATTCAGCAGGTGCTCGA----CTCCAAAAATA   1678
                     | |.|.||.|||||.||||||||||||||.||.||    |.|    |..|
BL03664___mut   1654 ACGATCATTGAAGACATCATTCAGCAGGTCCTTGATGACCGC----ACGA   1699

BSNT_02755___   1679 TAGATATTAAAAAACTCCGCGAGGAAGCGGCGATTATGATGAGCTGCAAA   1728
                     |.||.||.||||||||.|||||.|||||.||.||.|||||||||||||||
BL03664___mut   1700 TCGACATCAAAAAACTGCGCGAAGAAGCCGCAATCATGATGAGCTGCAAA   1749

BSNT_02755___   1729 GGCTCCATCAAAGCAAATCGCCACCTCAGAAACGATGAAATCAAAGCGCT   1778
                     ||||||||||||||.||||..|||||..|..||||.|||||||..||.||
BL03664___mut   1750 GGCTCCATCAAAGCCAATCATCACCTGCGGGACGACGAAATCACCGCCCT   1799

BSNT_02755___   1779 TCTGGACGACCTCCGAAGCACATCAGACCCATTTACATGCCCGCACGGCC   1828
                     .||.||.||.||.||.||.|||||.|||||.||.||||||||||||||||
BL03664___mut   1800 GCTCGATGAGCTGCGCAGAACATCCGACCCTTTCACATGCCCGCACGGCC   1849

BSNT_02755___   1829 GCCCGATCATCATTCACCACTCGACATATGAGATGGAAAAGATGTTCAAA   1878
                     |.|||||||||||.|||.||||.||.|||||||||||.||||||||.||.
BL03664___mut   1850 GGCCGATCATCATCCACTACTCCACCTATGAGATGGAGAAGATGTTTAAG   1899

BSNT_02755___   1879 CGCGTGATGTAG   1890
                     ||.||.|||||.
BL03664___mut   1900 CGGGTAATGTAA   1911


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