Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03771 and BL03674
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03771___era.1.5803.seq
# -bsequence dna-align/BL03674___era.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03771___era-BL03674___era.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03771___era-BL03674___era.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03771___era
# 2: BL03674___era
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 922
# Identity: 720/922 (78.1%)
# Similarity: 720/922 (78.1%)
# Gaps: 32/922 ( 3.5%)
# Score: 2780.5
#
#
#=======================================
BSNT_03771___ 1 ATGACGAACGAAAGCTTTAAATCAGGATTTGTATCCATTATTGGAAGACC 50
|||||..|.|||||||||||||||||||||||.||.|||||.|||.||||
BL03674___era 1 ATGACACAGGAAAGCTTTAAATCAGGATTTGTCTCGATTATCGGACGACC 50
BSNT_03771___ 51 AAACGTAGGAAAATCTACATTTTTGAACAGAGTCATTGGACAAAAAATCG 100
||||||||||||||||||.||||||||..|.||.||.||.||||||||||
BL03674___era 51 AAACGTAGGAAAATCTACTTTTTTGAATCGCGTAATCGGCCAAAAAATCG 100
BSNT_03771___ 101 CGATCATGAGCGATAAGCCCCAAACGACGAGAAACAAGGTGCAAGGAGTA 150
|.|||||||||||.||.||.|||||.||.||||||||.||||||||.||.
BL03674___era 101 CCATCATGAGCGACAAACCGCAAACAACAAGAAACAAAGTGCAAGGTGTG 150
BSNT_03771___ 151 CTGACGACAGGCACATCACAAACCATTTTTATTGACACACCAGGGATTCA 200
|||||.||.|..|||||.||.||.||||||||.||.||.||.||.|||||
BL03674___era 151 CTGACAACCGATACATCCCAGACGATTTTTATCGATACGCCCGGCATTCA 200
BSNT_03771___ 201 TAAACCTAAGCATAAGCTTGGG-GACTTTATGATGAAAGTGGCGCAAAAT 249
||||||.|||||||| .||||| ||.|||||||||||.||||||||.||.
BL03674___era 201 TAAACCGAAGCATAA-ATTGGGCGATTTTATGATGAAGGTGGCGCACAAC 249
BSNT_03771___ 250 ACATTAAAAGAAGTCGATTTGATCTTGTTTATGATCAATGCTGAGGAAGG 299
||.|||||.||||||||.|||||||||||.|||||||||||.||||||||
BL03674___era 250 ACTTTAAAGGAAGTCGACTTGATCTTGTTCATGATCAATGCGGAGGAAGG 299
BSNT_03771___ 300 CTACGGGAAGGGCGACGAATTCATCATTGAGAAATTGCAGACGATGTC-- 347
||||||.||.|||||||||||.|||||||||..||| |.|.|..|||
BL03674___era 300 CTACGGAAAAGGCGACGAATTTATCATTGAGCGATT--AAAAGGAGTCAA 347
BSNT_03771___ 348 TACGCCTGTATTCTTAATCGTAAACAAAATCGATAAAATTCATCCCGACC 397
.|||||.|||||.||.|||||.||||||||.||....||||||||.||..
BL03674___era 348 GACGCCGGTATTTTTGATCGTCAACAAAATTGACCGGATTCATCCGGATG 397
BSNT_03771___ 398 AATTGCTTCTGCTAATTGACGAATACCGCAAAC--GTTATCCTTTTAAGG 445
|..|.|||.||||.||.||.||.|||.| ||| |.|||||.|||.|||
BL03674___era 398 AGCTTCTTGTGCTGATCGATGAGTACAG--AACCAGGTATCCGTTTCAGG 445
BSNT_03771___ 446 AAATTGTTCCGATTTCTGCTTTAGAAGGAAATAACATCGAAACCTTGCTC 495
||||.||||||||.||.||..|.||.||||||||.|||||.| |
BL03674___era 446 AAATCGTTCCGATCTCCGCCCTTGAGGGAAATAATATCGATA-------C 488
BSNT_03771___ 496 GCT-------CAGATTGAAGCGTATTTGCCGGAAGGGCCGCAATTCTATC 538
||| ||.|||||.|..||||||||||||||.|||||.||.||.|
BL03674___era 489 GCTTTTAAAGCAAATTGAGGATTATTTGCCGGAAGGTCCGCAGTTTTACC 538
BSNT_03771___ 539 CGAGTGACCAGGTAACTGACCACCCTGAACGATTTATCATTTCTGAATTA 588
|||||||||||||.||.||.||.||.||.|||||||||||||||||..|.
BL03674___era 539 CGAGTGACCAGGTGACCGATCATCCGGAGCGATTTATCATTTCTGAGCTG 588
BSNT_03771___ 589 ATCAGGGAAAAGGTGCTGCATTTGACGAGAGAAGAAATCCCGCACAGCAT 638
||..|||||||.|||||||||.||||.||.|||||.|||||.||||||||
BL03674___era 589 ATTCGGGAAAAAGTGCTGCATCTGACAAGGGAAGAGATCCCTCACAGCAT 638
BSNT_03771___ 639 TGCGGTGGCCATCGAATCCATCAAAGGGCAGGACAACGGTTCTGTGCACG 688
||||||..|.|||||.|||||..|||..|.|||.||||||||||||.|.|
BL03674___era 639 TGCGGTCTCGATCGAGTCCATTCAAGAACGGGAAAACGGTTCTGTGTATG 688
BSNT_03771___ 689 T-AGCGGCAACGATTGTGGTCGAGCGGGATTCCCAGAAAGGCATCGTGAT 737
| ||| ||.||.||.||.||||||||.|||||.||.|||||.|||||.||
BL03674___era 689 TGAGC-GCGACCATCGTCGTCGAGCGAGATTCGCAAAAAGGGATCGTCAT 737
BSNT_03771___ 738 CGGTAAAAAAGGAAGCCTTCTAAAAGAGGTTGGAAAAAGAGCGAGAGCGG 787
|||.||||.|||.|||||.||.|||||..|.||.||..|.||.|||.|.|
BL03674___era 738 CGGAAAAAGAGGCAGCCTGCTTAAAGAAATCGGCAAGCGGGCAAGAACCG 787
BSNT_03771___ 788 ATATTGAAGCACTGTTGGGCTC--CCGTGTCTACCTT-GAATTGTGGGTG 834
||||.||.||.|||.|.||.|| |.||||.| || ||..|||||||.
BL03674___era 788 ATATCGAGGCGCTGCTCGGGTCATCGGTGTTT---TTAGAGCTGTGGGTT 834
BSNT_03771___ 835 AAAGTGCAGAAAGACTGGCGTAATAAAATGTCCCAGCTTCGCGATTTTGG 884
||||||||||||||||||||.||.||.|||||.||||||||.||||||||
BL03674___era 835 AAAGTGCAGAAAGACTGGCGCAACAAGATGTCTCAGCTTCGTGATTTTGG 884
BSNT_03771___ 885 CTTTAAAGAGGACGAATATTAA 906
.||||.|||.|||||.||||||
BL03674___era 885 ATTTAGAGAAGACGAGTATTAA 906
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