Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03768 and BL03676
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03768___glyQ.1.5803.seq
# -bsequence dna-align/BL03676___glyQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03768___glyQ-BL03676___glyQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03768___glyQ-BL03676___glyQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03768___glyQ
# 2: BL03676___glyQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 939
# Identity: 717/939 (76.4%)
# Similarity: 717/939 (76.4%)
# Gaps: 57/939 ( 6.1%)
# Score: 2833.5
#
#
#=======================================
BSNT_03768___ 1 TTGCTGCCGCAGTCAACTTATGAAAGAAAAGTGGAGGTGCTTGAAATGAA 50
.||||
BL03676___gly 1 ---------------------------------------------TTGAA 5
BSNT_03768___ 51 TATTCAAGACATGATTCTAACCTTGCAAAAGCATTGGTCCAGTCAGGGCT 100
|||||||||.||||||||.|||.||||||||||||||||||.|.|.||.|
BL03676___gly 6 TATTCAAGAAATGATTCTGACCCTGCAAAAGCATTGGTCCAATGAAGGAT 55
BSNT_03768___ 101 GTGTGCTTATGCAGGCTTACGATGTAGAAAAAGGAGCCGGCACGATGAGC 150
|.||.|||.|||||.|.||.||||||||.||.||.||.||||||||||||
BL03676___gly 56 GCGTACTTTTGCAGTCGTATGATGTAGAGAAGGGTGCAGGCACGATGAGC 105
BSNT_03768___ 151 CCGTATACATTTTTGCGCAGTATCGGCCCTGAGCCGTGGAAAGTGGCTTA 200
||.||||||||||||||.||..|.||.||||||||.||||||||.|||||
BL03676___gly 106 CCATATACATTTTTGCGGAGCCTTGGGCCTGAGCCTTGGAAAGTCGCTTA 155
BSNT_03768___ 201 TGTAGAGCCTTCCAGACGTCCTGCAGACGGCCGCTACGGGGAGAACCCGA 250
|||.|||||.||.||.||.|||||.|||||..|.|||||.||.||.||||
BL03676___gly 156 TGTGGAGCCGTCAAGGCGCCCTGCGGACGGAAGATACGGTGACAATCCGA 205
BSNT_03768___ 251 ACAGACTGTATCAGCATCATCAGTTCCAGGTCATTATTAAACCGTCTCCT 300
||||.||.||||||||.|||||.||.|||||.||.|||||.||||||||.
BL03676___gly 206 ACAGGCTTTATCAGCACCATCAATTTCAGGTGATCATTAAGCCGTCTCCA 255
BSNT_03768___ 301 GATAACATTCAAGAACTGTATTTAGATTCCTTGCGTGCTCTTGGAATTGA 350
||.|||||||||||.||.|||||||||||.||....||.||||||||.||
BL03676___gly 256 GACAACATTCAAGAGCTTTATTTAGATTCATTAAAAGCCCTTGGAATCGA 305
BSNT_03768___ 351 TCCGCTTGAGCACGATATTCGCTTTGTTGAAGACAACTGGGAGAATCCGT 400
.||.||.|||||.|||||.||||||||.||.||.||||||||.|||||||
BL03676___gly 306 CCCTCTGGAGCATGATATCCGCTTTGTCGAGGATAACTGGGAAAATCCGT 355
BSNT_03768___ 401 CTTTAGGCTGCGCGGGTCTAGGCTGGGAAGTTTGGCTTGACGGAATGGAA 450
|..|.||||||||.||.||.|||||||||||.|||||||||||.||||||
BL03676___gly 356 CGCTCGGCTGCGCCGGGCTTGGCTGGGAAGTATGGCTTGACGGCATGGAA 405
BSNT_03768___ 451 ATAACACAATTTACGTATTTCCAGCAGGTCGG-GGGATTAGAGTGTAAAC 499
||.||.||.||.||.|||||.||||||||||| |||.|| |||||.||||
BL03676___gly 406 ATTACCCAGTTCACCTATTTTCAGCAGGTCGGCGGGCTT-GAGTGCAAAC 454
BSNT_03768___ 500 CCGTTTCTGTAGAGATTACGTATGGAATAGAGCGTCTCGCGTCTTATATC 549
|.|||||.||.||.||.||.||.||.||.||.||.||.||.|||||||||
BL03676___gly 455 CGGTTTCCGTGGAAATCACATACGGTATCGAACGCCTTGCTTCTTATATC 504
BSNT_03768___ 550 CAGGATAAAGAAAACGTGTTTGA-CTTGGAATGGACGTCAGGGTTTACAG 598
||.||||||||||||||.||||| ||| |||||||||...||.|.|||..
BL03676___gly 505 CAAGATAAAGAAAACGTCTTTGATCTT-GAATGGACGAACGGCTATACGA 553
BSNT_03768___ 599 TAAAAGATTTATTCATGATGGCTGAATATGAGCATTCTGTTTATACGTTT 648
|||||||..|.||||.||||||||||||.||||||||.||.|||||||||
BL03676___gly 554 TAAAAGACCTGTTCAAGATGGCTGAATACGAGCATTCCGTCTATACGTTT 603
BSNT_03768___ 649 GAAACATCAGACGTCGATATGTTGTTCCAATTGTT--CAGCACATATGAA 696
||.|||||.||||||||.|||.|||||.||||||| || ||.||.|||
BL03676___gly 604 GAGACATCTGACGTCGACATGCTGTTCGAATTGTTTGCA--ACGTACGAA 651
BSNT_03768___ 697 AAAGAAGC-GATCAAG-CAAATGGATAACGGACTTGTTCATCCAGCGTAT 744
|||||||| .||| | ||.||||||.|.||||||||.|||||.||.|||
BL03676___gly 652 AAAGAAGCAAATC--GCCAGATGGATCAGGGACTTGTCCATCCTGCATAT 699
BSNT_03768___ 745 GACTATGTGCTGAAATGCTCGCACACCTTCAATCTGCTTGACGCCAAAGG 794
||.|||||..|||||||||||||.||.|||||..||||||||||.|||||
BL03676___gly 700 GATTATGTTTTGAAATGCTCGCATACGTTCAACTTGCTTGACGCAAAAGG 749
BSNT_03768___ 795 TGCGATCTCTGTTACCGAGCGGACGGGCTATATCGCAAGAGTGCGGAATT 844
.|||||.||.||.||.|||||.||.||.|||||||||||.|||.|.||..
BL03676___gly 750 GGCGATTTCCGTCACGGAGCGCACAGGATATATCGCAAGGGTGAGAAACC 799
BSNT_03768___ 845 TAGCTAGAAAAGTAGCAAAAACCTATTATGAGGAACGAGAAAAACTAGGG 894
|.||.||||||||.||.|||||.||||||||.|||||.|||||..|.||.
BL03676___gly 800 TGGCCAGAAAAGTGGCGAAAACGTATTATGATGAACGCGAAAAGTTGGGT 849
BSNT_03768___ 895 TTCCCAATGCTTAAAGGGGAGGGTTCTTCTCATGAGTAA 933
|||||||||||.||.|.|||.|...||||.|||||||||
BL03676___gly 850 TTCCCAATGCTGAAGGAGGAAGAGGCTTCACATGAGTAA 888
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