Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03761 and BL03680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03761.1.5803.seq
# -bsequence dna-align/BL03680___yqxD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03761-BL03680___yqxD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03761-BL03680___yqxD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03761
# 2: BL03680___yqxD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 514
# Identity: 357/514 (69.5%)
# Similarity: 357/514 (69.5%)
# Gaps: 41/514 ( 8.0%)
# Score: 1177.0
#
#
#=======================================
BSNT_03761 1 ATGGAGGGATGGAGAATTACTCTTCTTAATGAACAAGAAAAGACGATTTT 50
|||||||||||||||||||.|||||| ||||.||||||.|||||||||
BL03680___yqx 1 ATGGAGGGATGGAGAATTAGTCTTCT---TGAAAAAGAAAGGACGATTTT 47
BSNT_03761 51 TGTCGATGCTGATGCTTGTCCGGTAAAAGATGAAATTTTACAAACAGCAT 100
|||||||||.||.||.||.|||||.|||||||||.|..|..|||||||..
BL03680___yqx 48 TGTCGATGCAGACGCATGCCCGGTGAAAGATGAAGTGCTCAAAACAGCGG 97
BSNT_03761 101 CCGAGTATGAAGTTCAAGTTCTTTTTGTCGCTTCATTTGAACATTATCAG 150
|.||.|..||.||..|.||..|.||.||.||||||||.||.||||.|||.
BL03680___yqx 98 CGGATTTCGACGTAAAGGTGGTATTCGTGGCTTCATTCGAGCATTTTCAA 147
BSNT_03761 151 CTTTCCAGAAGCAATGAAGAA---AAATGGAAGTATGTTGATCCTCATAA 197
.| ||.|||.||.|||||| ||.||||..|||||.|||||.||.||
BL03680___yqx 148 AT---CACAAGGAAAGAAGAAGAGAATTGGACATATGTCGATCCGCACAA 194
BSNT_03761 198 AGAAGCTGCTGATTTATATATCGCAAATCACGTGAAACCGGGAGATATTG 247
||||||.||.|||.|.||.||.||.||.||.||...|||.||.|||.|.|
BL03680___yqx 195 AGAAGCAGCGGATCTGTACATTGCCAACCATGTTCGACCTGGTGATGTCG 244
BSNT_03761 248 TTGTGACGCAGGACATCGGATTAGCATCTCTGCTG-TTGAACAGAAATGT 296
|.||.||.||.||.|||||..|.|||||.||..|| ||| .||.|||.||
BL03680___yqx 245 TCGTCACACAAGATATCGGGCTGGCATCGCTTTTGCTTG-GCAAAAAGGT 293
BSNT_03761 297 CTCCGTTATGTCGGAAAGAGGTCGTCTTTACAAAGAAGACACGATTGAT- 345
||..||.||||||||.|||||...|||||.|.||||..||.|.||.|||
BL03680___yqx 294 CTATGTGATGTCGGAGAGAGGCTATCTTTTCGAAGAGAACTCCATCGATC 343
BSNT_03761 346 ------TTTGCCCTAGAGGGCCGTCATTTTTCCGGCAAACAA------AG 383
|||.|| ||||||| ||.|..|||| ||
BL03680___yqx 344 ATGCTCTTTTCC-------GCCGTCA------CGTCGCACAAAAATTGAG 380
BSNT_03761 384 AAGAAAAGG-CGTATATGCCAAAGGGCCTAAAAAATTGAATAAAGAAGAT 432
|||||..|| ||| ||..|.|||||.||.||||||.||...||.|||||.
BL03680___yqx 381 AAGAAGCGGACGT-TACACGAAAGGCCCGAAAAAACTGGTCAAGGAAGAC 429
BSNT_03761 433 CGAGAACGATTTATTACACTGCTGCAAAAAATCCTGTCGAACGATGAAGG 482
||.||.||||||.|.|.|..|||||||||||||.|||||||...|||| |
BL03680___yqx 430 CGGGAGCGATTTGTCAAAGAGCTGCAAAAAATCTTGTCGAAAATTGAA-G 478
BSNT_03761 483 GATTT-TGCACTAA 495
||||| .|.|||||
BL03680___yqx 479 GATTTACGTACTAA 492
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