Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03758 and BL03682
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence dna-align/BSNT_03758___sigA.1.5803.seq
# -bsequence dna-align/BL03682___sigA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03758___sigA-BL03682___sigA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03758___sigA-BL03682___sigA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03758___sigA
# 2: BL03682___sigA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1122
# Identity: 916/1122 (81.6%)
# Similarity: 916/1122 (81.6%)
# Gaps: 6/1122 ( 0.5%)
# Score: 3767.5
#
#
#=======================================
BSNT_03758___ 1 ATGGCTGATAAACAAACCCACGAG------ACAGAATTAACATTCGACCA 44
|||||||||||||||.|.|||||| ||.|||||.|||||.||.||
BL03682___sig 1 ATGGCTGATAAACAAGCTCACGAGACCGAAACTGAATTCACATTTGAACA 50
BSNT_03758___ 45 AGTAAAAGAGCAATTAACAGAGTCTGGTAAAAAACGTGGCGTTTTGACAT 94
.||.|..||.|||||||||||..|.||.|||||.||.||.||..|.||||
BL03682___sig 51 GGTGAGGGATCAATTAACAGAAGCCGGCAAAAAGCGCGGAGTGCTCACAT 100
BSNT_03758___ 95 ATGAAGAAATTGCTGAGCGTATGTCCAGCTTTGAAATTGAATCAGACCAA 144
|||||||||||||.|||||.|||||||||||.||.||.||||||||||||
BL03682___sig 101 ATGAAGAAATTGCAGAGCGCATGTCCAGCTTCGATATCGAATCAGACCAA 150
BSNT_03758___ 145 ATGGATGAGTATTATGAATTTTTAGGTGAACAAGGTGTTGAATTAATTAG 194
||||||||||||||||||||||||||.||||||||.||||||||||||||
BL03682___sig 151 ATGGATGAGTATTATGAATTTTTAGGAGAACAAGGCGTTGAATTAATTAG 200
BSNT_03758___ 195 TGAGAATGAAGAAACAGAAGATCCTAATATTCAGCAGCTTGCCAAAGCCG 244
.|||||.||||||||.||.||||||||||||||.|||||.|||||.||||
BL03682___sig 201 CGAGAACGAAGAAACTGAGGATCCTAATATTCAACAGCTGGCCAAGGCCG 250
BSNT_03758___ 245 AAGAAGAATTTGACCTTAATGACCTAAGTGTACCGCCTGGCGTTAAAATC 294
|||||||||||||||||||.||..||||.||.||.||.||||||||.||.
BL03682___sig 251 AAGAAGAATTTGACCTTAACGATTTAAGCGTGCCTCCGGGCGTTAAGATA 300
BSNT_03758___ 295 AATGACCCAGTTCGTATGTATTTAAAGGAAATTGGTCGGGTTAACCTTCT 344
||.|||||.||.||.|||||..|.||.|||||.||.|||||.||||||.|
BL03682___sig 301 AACGACCCTGTCCGCATGTACCTGAAAGAAATCGGACGGGTAAACCTTTT 350
BSNT_03758___ 345 TTCTGCAAAAGAAGAAATCGCCTACGCTAAAAAGATTGAAGAAGGTGACG 394
.|||||||||||||||||||..|||||.|||||.||.||.|||||.||||
BL03682___sig 351 GTCTGCAAAAGAAGAAATCGAATACGCAAAAAAAATCGAGGAAGGCGACG 400
BSNT_03758___ 395 AAGAATCTAAACGCAGATTGGCTGAAGCGAACCTGCGGCTTGTTGTCAGT 444
||||.||.||.|||.|..|.||||||||.|||.||.|.|||||.|||||.
BL03682___sig 401 AAGAGTCGAAGCGCCGTCTCGCTGAAGCCAACTTGAGACTTGTCGTCAGC 450
BSNT_03758___ 445 ATCGCAAAACGGTATGTCGGACGCGGTATGCTGTTCCTTGATCTGATCCA 494
||||||||||||||||||||.|||||.|||||.||||||||.||.||.||
BL03682___sig 451 ATCGCAAAACGGTATGTCGGCCGCGGAATGCTTTTCCTTGACCTTATTCA 500
BSNT_03758___ 495 GGAAGGAAACATGGGTCTGATGAAAGCCGTTGAAAAATTTGATTATCGCA 544
|||||||||||||||.||||||||.||.||.|||||.|||||.||.||||
BL03682___sig 501 GGAAGGAAACATGGGCCTGATGAAGGCGGTGGAAAAGTTTGACTACCGCA 550
BSNT_03758___ 545 AAGGTTATAAATTCAGTACGTATGCTACGTGGTGGATCAGACAGGCGATT 594
||||.|||||.|||||.||.||.||.||.|||||||||||||||||||||
BL03682___sig 551 AAGGATATAAGTTCAGCACATACGCGACATGGTGGATCAGACAGGCGATT 600
BSNT_03758___ 595 ACACGTGCCATTGCCGATCAGGCGAGAACGATCCGGATTCCCGTTCATAT 644
|||.|.||.||||||||.|||||||||||||||.|||||||.||||||||
BL03682___sig 601 ACAAGGGCGATTGCCGACCAGGCGAGAACGATCAGGATTCCTGTTCATAT 650
BSNT_03758___ 645 GGTTGAAACCATTAATAAATTAATCCGTGTGCAGCGTCAATTACTGCAAG 694
||||||||||||.||.||..|.||.|||||.||..|.||..|.||.||.|
BL03682___sig 651 GGTTGAAACCATCAACAAGCTGATTCGTGTTCAAAGGCAGCTCCTTCAGG 700
BSNT_03758___ 695 ACTTAGGCAGAGAACCAACACCTGAAGAAATTGCGGAAGATATGGATTTA 744
|..|.|||.|.||.|||||.||||||||.||||||||||||||||||.|.
BL03682___sig 701 ATCTCGGCCGCGAGCCAACGCCTGAAGAGATTGCGGAAGATATGGATCTG 750
BSNT_03758___ 745 ACGCCTGAAAAAGTACGCGAAATCTTAAAGATTGCTCAAGAGCCGGTATC 794
||||||||.|||||.||.||||||.|||||||.||.||.||.|||||.||
BL03682___sig 751 ACGCCTGAGAAAGTCCGTGAAATCCTAAAGATCGCCCAGGAACCGGTTTC 800
BSNT_03758___ 795 TCTGGAAACACCGATCGGTGAAGAGGATGACTCGCACCTTGGTGATTTCA 844
.||.||.||.|||||||||||||||||.||.||.||.||.||.||.||||
BL03682___sig 801 ACTCGAGACTCCGATCGGTGAAGAGGACGATTCACATCTGGGAGACTTCA 850
BSNT_03758___ 845 TTGAAGACCAAGAAGCAACTTCACCTTCTGACCACGCCGCATACGAGCTA 894
||||.||.||.|||||.|||||.||.||.||.||.||.|||||.||..|.
BL03682___sig 851 TTGAGGATCAGGAAGCGACTTCTCCATCAGATCATGCAGCATATGAATTG 900
BSNT_03758___ 895 TTGAAAGAGCAGCTGGAAGATGTGCTTGATACGTTAACTGATCGTGAAGA 944
.|||||||.|||||.|||||||||||.|||||.||.||.||.||||||||
BL03682___sig 901 CTGAAAGAACAGCTTGAAGATGTGCTGGATACATTGACAGACCGTGAAGA 950
BSNT_03758___ 945 AAATGTATTGCGTCTTCGATTCGGTCTTGATGACGGCCGTACAAGAACAT 994
||||||..|.||.|||||.|||||.||||||||.||.|||||||||||||
BL03682___sig 951 AAATGTGCTCCGCCTTCGCTTCGGCCTTGATGATGGTCGTACAAGAACAT 1000
BSNT_03758___ 995 TAGAAGAGGTCGGCAAAGTATTTGGAGTAACGAGAGAGCGTATTCGACAA 1044
|||||||.||.||.||.||.||.||.|||||.|||||.||.|||||.|||
BL03682___sig 1001 TAGAAGAAGTTGGTAAGGTGTTCGGGGTAACAAGAGAACGAATTCGTCAA 1050
BSNT_03758___ 1045 ATCGAAGCCAAAGCGTTGCGGAAACTAAGACATCCTAGCAGAAGTAAACG 1094
||.|||||.|||||..|.||.|||.||||||||||.||||||||.|||||
BL03682___sig 1051 ATAGAAGCTAAAGCACTTCGTAAATTAAGACATCCAAGCAGAAGCAAACG 1100
BSNT_03758___ 1095 TTTGAAAGATTTCCTCGAATAA 1116
.|||||||||||.|||||||||
BL03682___sig 1101 CTTGAAAGATTTTCTCGAATAA 1122
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