Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03735 and BL03705
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:46
# Commandline: needle
# -asequence dna-align/BSNT_03735___yqgC.1.5803.seq
# -bsequence dna-align/BL03705___yqgC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03735___yqgC-BL03705___yqgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03735___yqgC-BL03705___yqgC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03735___yqgC
# 2: BL03705___yqgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 485
# Identity: 350/485 (72.2%)
# Similarity: 350/485 (72.2%)
# Gaps: 4/485 ( 0.8%)
# Score: 1186.0
#
#
#=======================================
BSNT_03735___ 1 ATGGATATGTTGTATTGGCTGTTGATTGCAGCGGTTTTTATCATTGCCTT 50
||||||.|.|||||||||.|..|.|||||.||..|.||..|||||||.||
BL03705___yqg 1 ATGGATGTTTTGTATTGGATCATCATTGCGGCAATGTTCGTCATTGCTTT 50
BSNT_03735___ 51 TATCGGGCTGGTGTATCCTGTTATTCCGAGCGTAGTATTTATTGTTGCCG 100
.|||||.||.||.|||||..|||||||||||||.||.||.||.||.||||
BL03705___yqg 51 CATCGGCCTTGTCTATCCCATTATTCCGAGCGTCGTTTTCATCGTAGCCG 100
BSNT_03735___ 101 GATTTGTATTGTACGGATTTTTATTTTCATTCAGTCCGTATTCTTATATG 150
|.|||||..|.|||||||||||||||.|||||.|.|..||.||.||..|.
BL03705___yqg 101 GCTTTGTTCTATACGGATTTTTATTTACATTCGGGCATTACTCCTACCTA 150
BSNT_03735___ 151 TTCTGGCTTGTTG-AGGCAGTTTTTGCCGCAGTATTATTTGCAGCAGATT 199
||.|||.|..||| ||||| |||||.|.||.|||||.|||||.||.||.|
BL03705___yqg 151 TTTTGGATCATTGAAGGCA-TTTTTACAGCCGTATTGTTTGCCGCCGACT 199
BSNT_03735___ 200 ACGTGTCGAATCTGCTTGGAGTAAAAAGGTTCGGAGGAAGCAAAGCTGCC 249
|..|..|.|||||.||.||..|.||..|.||.||.||.||||..||.||.
BL03705___yqg 200 ATATTACAAATCTCCTCGGCATTAAGCGCTTTGGCGGCAGCAGGGCAGCG 249
BSNT_03735___ 250 ATATGGGGAAGCACGATCGGTTTATTAATCGGGCCTTTTGTCATTCCGGT 299
||||||||.|||||||||||..|..|...|||.||.|||||.||.|||||
BL03705___yqg 250 ATATGGGGCAGCACGATCGGCCTTCTGGCCGGACCGTTTGTGATACCGGT 299
BSNT_03735___ 300 TGCAGGGATCATATTGGGGCCGTTTATCGGGGCTGTTTGC-GCAGAACTT 348
.||.||.||.||.|||||.|||||||||||||| .||.|| |..||..|.
BL03705___yqg 300 GGCGGGCATTATTTTGGGTCCGTTTATCGGGGC-CTTGGCGGGTGAGGTG 348
BSNT_03735___ 349 ATCGTCCATCAGAAGGACTTAAAGTCAGCGTTTAAAATTGGCCTCGGCTC 398
||.||||||||||||||.|||||..|.|||...|.|||.||..||||.||
BL03705___yqg 349 ATTGTCCATCAGAAGGATTTAAAAACGGCGGCCAGAATCGGAATCGGTTC 398
BSNT_03735___ 399 ACTCATTGGTTTTTTAACAGGGGTTATTGCAAAGGGCATCATACAGCTTT 448
|.|.||.||.|||.|..||||.|||.||||.||..||.|.||.|||||..
BL03705___yqg 399 ATTGATCGGGTTTATTTCAGGCGTTTTTGCGAAAAGCGTGATTCAGCTGA 448
BSNT_03735___ 449 TGATGATCGGATACTTTTTATGGACGGTCCTATAA 483
|.||||||||.||||||||||..||.||.||.|||
BL03705___yqg 449 TAATGATCGGCTACTTTTTATATACTGTGCTCTAA 483
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