Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03734 and BL03706
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:46
# Commandline: needle
# -asequence dna-align/BSNT_03734___sodA.1.5803.seq
# -bsequence dna-align/BL03706___sodA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03734___sodA-BL03706___sodA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03734___sodA-BL03706___sodA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03734___sodA
# 2: BL03706___sodA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 610
# Identity: 506/610 (83.0%)
# Similarity: 506/610 (83.0%)
# Gaps: 2/610 ( 0.3%)
# Score: 2102.0
#
#
#=======================================
BSNT_03734___ 1 ATGGCTTACGAACTTCCAGAATTACCTTATGCGTACGATGCTTTAGAACC 50
|||||||||.||||||||||||||||||||||.||||||||.||||||||
BL03706___sod 1 ATGGCTTACAAACTTCCAGAATTACCTTATGCTTACGATGCGTTAGAACC 50
BSNT_03734___ 51 GCATATCGACAAGGAAACTATGACTATTCACCATACGAAACACCACAACA 100
.||.||||||||.||.||.||||.|||||||||||||||.|||||.||||
BL03706___sod 51 TCACATCGACAAAGAGACGATGAATATTCACCATACGAAGCACCATAACA 100
BSNT_03734___ 101 CATACGTGACAAATTTAAACAAAGCGGTTGAAGG-AAACACTGCTCTTGC 149
||||.||.|||||.||.|||.|||||||.|.||| ||||| .|.|||||.
BL03706___sod 101 CATATGTTACAAAATTGAACGAAGCGGTGGCAGGCAAACA-GGATCTTGA 149
BSNT_03734___ 150 CAACAAATCAGTTGAAGAGCTTGTTGCAGATCTTGATTCTGTTCCTGAAA 199
.|.||||||.||||||||||||||||||.|.||||||.|.||.||.||||
BL03706___sod 150 AAGCAAATCTGTTGAAGAGCTTGTTGCAAACCTTGATGCAGTACCGGAAA 199
BSNT_03734___ 200 ACATCCGCACTGCGGTCCGCAACAACGGCGGCGGACACGCGAACCACAAA 249
|||||||.||.||.|||||||||||.|||||.||.||.||.||||||..|
BL03706___sod 200 ACATCCGTACAGCTGTCCGCAACAATGGCGGAGGGCATGCCAACCACTCA 249
BSNT_03734___ 250 TTATTCTGGACACTTTTATCTCCAAACGGCGGAGGCGAACCGACTGGCGC 299
||.|||||||.||||.|.|||||||||||.|||||||..||.|||||.|.
BL03706___sod 250 TTGTTCTGGAAACTTCTTTCTCCAAACGGAGGAGGCGCTCCAACTGGTGA 299
BSNT_03734___ 300 GCTTGCTGAAGAGATCAGCAGTGTATTTGGAAGCTTTGACAAATTCAAAG 349
..|.||.||||..||||.|||...|||.||.|||||.||..|||||||||
BL03706___sod 300 ATTGGCAGAAGCCATCAACAGCAAATTCGGCAGCTTCGATCAATTCAAAG 349
BSNT_03734___ 350 AGCAATTCGCAGCAGCAGCAGCTGGACGCTTCGGTTCTGGCTGGGCATGG 399
|..|.||.||.||.||||||||.||.||.|||||.||.||||||||||||
BL03706___sod 350 AAGACTTTGCGGCTGCAGCAGCAGGCCGTTTCGGCTCCGGCTGGGCATGG 399
BSNT_03734___ 400 CTTGTTGTGAACAACGGGAAACTTGAAATCACAAGCACGCCAAACCAAGA 449
||||||||.||.|||||..|.|||||||||||||||||||||||||||||
BL03706___sod 400 CTTGTTGTCAATAACGGAGAGCTTGAAATCACAAGCACGCCAAACCAAGA 449
BSNT_03734___ 450 TTCTCCGCTTTCAGAAGGCAAAACGCCTATCTTAGGTCTTGACGTTTGGG 499
||||||.||||||||||||||.||.|||||||||||||||||.||.||||
BL03706___sod 450 TTCTCCTCTTTCAGAAGGCAAGACTCCTATCTTAGGTCTTGATGTATGGG 499
BSNT_03734___ 500 AGCATGCTTACTACCTTAACTATCAAAACCGCCGTCCTGATTACATTTCA 549
||||.||.||||||||.||.|||||||||||||||||.|||||||||..|
BL03706___sod 500 AGCACGCATACTACCTGAATTATCAAAACCGCCGTCCAGATTACATTAAA 549
BSNT_03734___ 550 GCTTTCTGGAATGTTGTAAACTGGGACGAAGTGGCTCGTCTATACAGCGA 599
||.||||||||.||.||.||||||||.|||||.||.||.||.||||||||
BL03706___sod 550 GCATTCTGGAACGTCGTTAACTGGGATGAAGTTGCACGCCTTTACAGCGA 599
BSNT_03734___ 600 AGCAAAATAA 609
||||||||||
BL03706___sod 600 AGCAAAATAA 609
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