Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03723 and BL03729

See Amino acid alignment / Visit BSNT_03723 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence dna-align/BSNT_03723___yqzD.1.5803.seq
#    -bsequence dna-align/BL03729___yqzD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03723___yqzD-BL03729___yqzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03723___yqzD-BL03729___yqzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03723___yqzD
# 2: BL03729___yqzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 355
# Identity:     272/355 (76.6%)
# Similarity:   272/355 (76.6%)
# Gaps:           5/355 ( 1.4%)
# Score: 1026.5
# 
#
#=======================================

BSNT_03723___      1 GTGGAAATTGCTATTATTGCGTTGTTTATCGTCAGTATAGCGCTAATTGC     50
                     ||||||||||||||.||||||.||.|..|.||||||||.|||||.|||||
BL03729___yqz      1 GTGGAAATTGCTATCATTGCGCTGCTCGTTGTCAGTATTGCGCTGATTGC     50

BSNT_03723___     51 ATTCTCATATTCTCAAAGAGACCCGATGAAAGATGTAGAACAGGAACTCG    100
                     |||||||||||.|||||||||.|||||.||.||.||.||||||||..|.|
BL03729___yqz     51 ATTCTCATATTTTCAAAGAGAACCGATCAAGGAAGTTGAACAGGAGTTGG    100

BSNT_03723___    101 AAACACTGCAGCTTTCTGCGATGCAGGAAATTTACAAGCTCAAAAAGAAA    150
                     ||||.||.|||||.||.||.|||||||||||.||.||.||.||||||||.
BL03729___yqz    101 AAACCCTTCAGCTGTCCGCCATGCAGGAAATCTATAAACTGAAAAAGAAG    150

BSNT_03723___    151 ATGACAGTGCTTGAGGAAGAATTACTGGAAACAAACCTTGTCATTCGCAA    200
                     |||||.||||||||||||||..|.||.||..||||..|.|||.|.||||.
BL03729___yqz    151 ATGACCGTGCTTGAGGAAGAGCTCCTCGATTCAAATGTGGTCGTCCGCAG    200

BSNT_03723___    201 ATC-AAAGCAGAGCGACATCAATCAAAAAATCGCTAAACAAATACTTTCT    249
                     |.| ||.||    ||..||||..||..|.||.||.||.||.||.|||||.
BL03729___yqz    201 ACCGAATGC----CGGAATCAGCCAGCATATTGCGAAGCAGATTCTTTCA    246

BSNT_03723___    250 AAATATAATAACGGTATGTCAGCTGAAGCGATTGCTAAAGCTGAGCATGT    299
                     ||||||.|.|||||.|||||.|..||.||.||.||.|||||||||||.||
BL03729___yqz    247 AAATATCAAAACGGCATGTCTGTAGACGCCATCGCAAAAGCTGAGCACGT    296

BSNT_03723___    300 ATCAGTGGAAGACGTGAATACGATTATCAAGGATAATGAGAAGGTGCTCG    349
                     |||.||.|||||.||.||..||||.||.||.||.|||||||.||||||.|
BL03729___yqz    297 ATCTGTCGAAGATGTCAAAGCGATCATTAAAGACAATGAGAGGGTGCTTG    346

BSNT_03723___    350 TATGA    354
                     |||||
BL03729___yqz    347 TATGA    351


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