Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02173 and BL03744
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence dna-align/BSNT_02173___ykaA.1.5803.seq
# -bsequence dna-align/BL03744___ykaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02173___ykaA-BL03744___ykaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02173___ykaA-BL03744___ykaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02173___ykaA
# 2: BL03744___ykaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 618
# Identity: 493/618 (79.8%)
# Similarity: 493/618 (79.8%)
# Gaps: 0/618 ( 0.0%)
# Score: 1965.0
#
#
#=======================================
BSNT_02173___ 1 ATGATAAGAAGAAAAAAAGATAAGTTCTCACTCCTTTTAACAGAAATTGC 50
|||.|.|.||||||||||||.|||||.||..|.|||||.||.||||||||
BL03744___yka 1 ATGTTGAAAAGAAAAAAAGACAAGTTTTCCGTGCTTTTGACGGAAATTGC 50
BSNT_02173___ 51 AAAGAACATAGACGAAACTGCAGAATATTTTGTGAATTTTAAGGTCACTA 100
|||.||..||||.|||||.||.||.||||||||.||.|.|||.||.||.|
BL03744___yka 51 AAAAAATTTAGATGAAACAGCTGAGTATTTTGTTAACTATAAAGTGACGA 100
BSNT_02173___ 101 ACCAAACGACTCTTAAAGAATTTGCAGATACGTTAAAGGAATATGAAACA 150
|.||.||.||.|||||||||||.||.|||||.|||||.||.|||||.|||
BL03744___yka 101 ATCAGACAACCCTTAAAGAATTCGCGGATACCTTAAAAGAGTATGAGACA 150
BSNT_02173___ 151 AAAGGTGACAATCATGTCCATGTCATGATTAAAGAGCTTAACAAAGCGTT 200
|||||.||.||..||||.|||...||||||||.|||||.||||||||.||
BL03744___yka 151 AAAGGAGATAACTATGTACATACGATGATTAAGGAGCTGAACAAAGCATT 200
BSNT_02173___ 201 CATCACTCCTATTGAGCGCGAAGATATCCTTCAGCTGACAAACAGCTTGG 250
.|||||.||.|||||.||||||||.|||||||||||.|||||||||.|.|
BL03744___yka 201 TATCACGCCGATTGAACGCGAAGACATCCTTCAGCTTACAAACAGCCTCG 250
BSNT_02173___ 251 ATGATGTGCTTGACGGAATCGAACATTTCTCTGCCATGATGGAAATTTTC 300
|||||||.||.|||||.|||||.||.||.||.||||||||||||||.|||
BL03744___yka 251 ATGATGTACTCGACGGCATCGAGCACTTTTCAGCCATGATGGAAATATTC 300
BSNT_02173___ 301 TCAATTACTTCATCAGACGAGCATATCGATAAATTCAGCGGATACATCAG 350
||.||.||.||.|||||.||||||||.||.|||||||||||.||.|||||
BL03744___yka 301 TCGATCACATCTTCAGATGAGCATATTGACAAATTCAGCGGCTATATCAG 350
BSNT_02173___ 351 AGAATGCGCGAAAGAGATTTTGATTACGATCGAGCTGCTGGCAGAAAATC 400
|||||||||.|||||.|||.||.|.||||||||..|||||||.|||||||
BL03744___yka 351 AGAATGCGCAAAAGAAATTCTGGTGACGATCGAATTGCTGGCGGAAAATC 400
BSNT_02173___ 401 GCTTAAAGGATATTCAGCCTCACGCAATCAAAATAAAAGAGTATGAGCAC 450
||.|.||.||.||||||||.|||||.||.|||||.|||||.||.||.||.
BL03744___yka 401 GCCTGAAAGAAATTCAGCCGCACGCCATTAAAATTAAAGAATACGAACAT 450
BSNT_02173___ 451 AGCTGTGACAACTTGCACAGAAAATCATTAAAGAATCTTTTCGGAAATGA 500
|.|||.||.|||.|||||.|.|||||..|.||.|||||||||||.||.||
BL03744___yka 451 AACTGCGATAACCTGCACCGCAAATCGCTGAAAAATCTTTTCGGTAAAGA 500
BSNT_02173___ 501 AACAGACCCAATCAAAGTCATTCAATATCGTGAAATTTACGAAACGCTTG 550
.|||||.||.||.|||||.||.||.||..|.|||||.||.||.|||||||
BL03744___yka 501 GACAGATCCGATTAAAGTGATCCAGTACAGAGAAATCTATGAGACGCTTG 550
BSNT_02173___ 551 AAGAAATCGCCGACTCTTGTCAAAGTGTTGCCAATAATCTTGAAACCATC 600
||||||||||.||.||.||.||||||||.||.||.|||.|.|||||||||
BL03744___yka 551 AAGAAATCGCAGATTCATGCCAAAGTGTAGCAAACAATTTAGAAACCATC 600
BSNT_02173___ 601 ATTATGAAAAACGCGTAA 618
||.||||||||.||||||
BL03744___yka 601 ATAATGAAAAATGCGTAA 618
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