Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02169 and BL03747
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_02169___spoIISB.1.5803.seq
# -bsequence dna-align/BL03747___spoIISB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02169___spoIISB-BL03747___spoIISB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02169___spoIISB-BL03747___spoIISB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02169___spoIISB
# 2: BL03747___spoIISB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 183
# Identity: 120/183 (65.6%)
# Similarity: 120/183 (65.6%)
# Gaps: 21/183 (11.5%)
# Score: 383.5
#
#
#=======================================
BSNT_02169___ 1 ATGGAACGTGCGTTTCAAAACAGATGCGAGCCCAG---AGCG-------- 39
|||||.|.|||.||||| ||.||.|||| ||||
BL03747___spo 1 ATGGAGCCTGCTTTTCA--------GCAAGACCAGGAAAGCGTAAAAAAG 42
BSNT_02169___ 40 -GCGAAGCCGTTTAAAATCCTGAAAAAACGTTCAACCACCAGTGTCGCAA 88
||...||| ||||||||..|.||||..|..||.|..||||.|.||||.|
BL03747___spo 43 CGCCTCGCC-TTTAAAATGTTTAAAAGGCAATCCAAAACCAATATCGCGA 91
BSNT_02169___ 89 GCTATCAAGTCAGTCCGCATACAGCAAGAATCTTCAAAGAAAACGAACGG 138
..||..|||||||.||..||||.|.|.|.||.|||....|||||||||||
BL03747___spo 92 AATACGAAGTCAGCCCCTATACCGAACGGATTTTCCGGCAAAACGAACGG 141
BSNT_02169___ 139 CTGATTGACGAGTATAAACGAAAAAAAGCATGA 171
|||||.|.||||||||||.||||||||||.|.|
BL03747___spo 142 CTGATCGGCGAGTATAAAAGAAAAAAAGCTTAA 174
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