Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01218 and BL03777

See Amino acid alignment / Visit BSNT_01218 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:44
# Commandline: needle
#    -asequence dna-align/BSNT_01218___lplB.1.5803.seq
#    -bsequence dna-align/BL03777___lplB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01218___lplB-BL03777___lplB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01218___lplB-BL03777___lplB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01218___lplB
# 2: BL03777___lplB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity:     736/978 (75.3%)
# Similarity:   736/978 (75.3%)
# Gaps:          45/978 ( 4.6%)
# Score: 2708.0
# 
#
#=======================================

BSNT_01218___      1 ATGGAAA-CAGTGCCG-AAGAAGGGAGATGCACCTGTTCTCACCGCTG--     46
                     ||||||| ||   ||| ||.||..|.||.||           ||||||  
BL03777___lpl      1 ATGGAAATCA---CCGCAAAAACAGGGAAGC-----------CCGCTGTT     36

BSNT_01218___     47 ------GAAAAGGCATCAGCTGGATGGCT----GCGCTCAAACGGGACAA     86
                           ||||||..|.|..|||   ||||    ||..|.||||||||.||
BL03777___lpl     37 AAGACAGAAAAGAAACCGACTG---GGCTAGAGGCCGTAAAACGGGATAA     83

BSNT_01218___     87 ATGGCTTTATCTTCTTCTTATTCCCGGTCTGCTTTATTTCTTGATTTTCA    136
                     |||||||||||||||.|||.||||||||.|..|.|||||..|.||.||.|
BL03777___lpl     84 ATGGCTTTATCTTCTGCTTGTTCCCGGTGTTTTATATTTTCTCATATTTA    133

BSNT_01218___    137 AATACTTGCCGATGTGGGGCGTGCTCATCGCTTTTAAAGACTACTCGCCA    186
                     ||||.|.|||||||||||||||..|.|||||.||.||.||.||.|||||.
BL03777___lpl    134 AATATTGGCCGATGTGGGGCGTATTAATCGCCTTCAAGGATTATTCGCCT    183

BSNT_01218___    187 TATCTCGGCTTCTGGAAAAGCGAATGGGTCGGCTTTGATTATTTCAAAGA    236
                     ||||||||.||.|||.|.||||||||||||||.||.||.|||||.|||||
BL03777___lpl    184 TATCTCGGATTTTGGCAGAGCGAATGGGTCGGATTCGAGTATTTTAAAGA    233

BSNT_01218___    237 CTTTTTTATGAATCCGGATTTTTTCCGGCTGCTGCGCAACACCCTCATGC    286
                     .||.|||||||||||.||.||.|||||.|||||.||.|||||.||.||||
BL03777___lpl    234 TTTCTTTATGAATCCTGACTTCTTCCGTCTGCTCCGAAACACGCTTATGC    283

BSNT_01218___    287 TGGCGAGC-CTGGATCTTTTGTTTGCCTTTCCCGCGCCTCTCATTTTGGC    335
                     |||| .|| ||.|||.|..|.|||||.|||||.||.||.||||||.|.||
BL03777___lpl    284 TGGC-CGCTCTCGATTTGATCTTTGCATTTCCGGCCCCGCTCATTGTCGC    332

BSNT_01218___    336 TCTGCTTT--TGAATGAGGTAAGAAAGGCCGTGTATAAAAGATGTATCCA    383
                     |||  |||  |||||||..|..|..|.|||.|.||||||.|.||.||.||
BL03777___lpl    333 TCT--TTTACTGAATGAACTGCGGCACGCCATCTATAAACGGTGCATTCA    380

BSNT_01218___    384 AACCTTTATTTACGTACCCCATTTTGTATCATGGACAATTGTGGTCAGCA    433
                     .||.|||||.||.||.||.|||||.||.||||||||.||.||.|||||||
BL03777___lpl    381 GACGTTTATATATGTTCCGCATTTCGTCTCATGGACGATCGTCGTCAGCA    430

BSNT_01218___    434 TCACCTTCGTTTTCTTTACTGTCGATACAGGTGTGATCAACAAATTGATT    483
                     |.||.||.||.||.||.||.||.|||||.||.|||||.||.|||.||.|.
BL03777___lpl    431 TAACGTTTGTCTTTTTCACGGTTGATACGGGCGTGATGAATAAAGTGCTG    480

BSNT_01218___    484 ATGAGCCTGACAGG-TGAGCAGATTTC-TTTCTTGTCGGATGCAGACTGG    531
                     ...|||.|.||.|| .||| |||||.| |||| |.||.|||.|.||.|||
BL03777___lpl    481 CAAAGCATAACGGGCCGAG-AGATTGCGTTTC-TCTCAGATCCCGAATGG    528

BSNT_01218___    532 TTCCGGCCAATGATTGTGATGCAAAGCATTTGGAAGGAGACAGGCTGGGG    581
                     |||.||||.|||||||||.||||||||||.|||||||||||.||||||||
BL03777___lpl    529 TTCAGGCCGATGATTGTGCTGCAAAGCATATGGAAGGAGACGGGCTGGGG    578

BSNT_01218___    582 AACGATTCTATTTTTGGCAGCGCTTGCTACGGTTGATCAAGAGCAGTATG    631
                     ||||||.||.|||.||||.|||||.|||.|||||||.|||||||||||||
BL03777___lpl    579 AACGATCCTGTTTCTGGCGGCGCTCGCTTCGGTTGACCAAGAGCAGTATG    628

BSNT_01218___    632 AAGCGGCCATCATGGACGGAGCGGGACGGTTCAGGAGAATGTGGCATATT    681
                     |||||||..|.||||||||.||.|||.||||.||||||||||||||.|||
BL03777___lpl    629 AAGCGGCAGTGATGGACGGTGCAGGAAGGTTGAGGAGAATGTGGCACATT    678

BSNT_01218___    682 ACGCTGCCGGCGATTAGAAGCACCATTATCGTTTTGTTGATTTTAAGAAT    731
                     ||.||.|||||.||.||||||||.||..||||..|..|.||.||||||||
BL03777___lpl    679 ACCCTTCCGGCCATCAGAAGCACGATCGTCGTGCTTCTCATCTTAAGAAT    728

BSNT_01218___    732 CGGCAGCTTTTTGAATCTAGGCTTTGAACAGGTGTATTTGATGACGAACT    781
                     |||||||||||||||..|.|||||.||||||.|.|.|||.|||||.||.|
BL03777___lpl    729 CGGCAGCTTTTTGAACATCGGCTTCGAACAGATTTTTTTAATGACCAATT    778

BSNT_01218___    782 CGCTCAACCGCAGTGTGGCTGACATCTTCGACACGTATGTGTACATGATG    831
                     |..|.|||||.||.||.|||||.|||||||||||.|||||.|  |||.||
BL03777___lpl    779 CCTTAAACCGGAGCGTAGCTGAAATCTTCGACACATATGTCT--ATGTTG    826

BSNT_01218___    832 --GGGATTACCCAAGGGGCGTATAGCTACAGCACGGCGGTCGGTTTGTTT    879
                       ||.||.||.||.||.||.||.||||||||.|||||.||||||.|.||.
BL03777___lpl    827 TCGGAATCACGCAGGGCGCATACAGCTACAGTACGGCAGTCGGTCTTTTC    876

BSNT_01218___    880 AAATCAGTTGTCGGGATTATCTTGATTTTTGGCGCCAATTACATTGCGAA    929
                     |||||.|||||||||||.|||.||||.||..|||||||.||.||.|||||
BL03777___lpl    877 AAATCGGTTGTCGGGATCATCCTGATATTCTGCGCCAACTATATCGCGAA    926

BSNT_01218___    930 AAAGTTTGATCAGGAAGGATTGTTTTAG    957
                     |||||||||.|||||.||..|||||||.
BL03777___lpl    927 AAAGTTTGACCAGGACGGTCTGTTTTAA    954


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01218 and BL03777

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
