Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02130 and BL03829
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence dna-align/BSNT_02130___xtmB.1.5803.seq
# -bsequence dna-align/BL03829___xtmB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02130___xtmB-BL03829___xtmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02130___xtmB-BL03829___xtmB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02130___xtmB
# 2: BL03829___xtmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1340
# Identity: 954/1340 (71.2%)
# Similarity: 954/1340 (71.2%)
# Gaps: 79/1340 ( 5.9%)
# Score: 3293.5
#
#
#=======================================
BSNT_02130___ 1 ATGATTGTAAAAGAAATCAACCCTCATTTCGAAGATTACGTGTTCAATTG 50
.||||..||||||||.||||.||.|||||.||||||||..||||.||.||
BL03829___xtm 1 TTGATCATAAAAGAAGTCAATCCGCATTTTGAAGATTATTTGTTTAACTG 50
BSNT_02130___ 51 GGAGCAGACGTACCAGTTTCTTGTCGGCGGCTACGGCTCATCCAAAAGCT 100
|||.|||||.|..||.||||||||||||||.|||||.||.||.|||||||
BL03829___xtm 51 GGATCAGACCTTTCAATTTCTTGTCGGCGGATACGGTTCGTCGAAAAGCT 100
BSNT_02130___ 101 ATCATACCGCATTGAAAATCGTGCTAAAGCTGCTGAAGGAAAAACGGACG 150
||||||||||.||.|||.||||..||||.|||||..|||||||.|||||.
BL03829___xtm 101 ATCATACCGCTTTAAAAGTCGTATTAAAACTGCTTCAGGAAAAGCGGACC 150
BSNT_02130___ 151 GCCCTTGTGATCCGGGAGGTGTTCGATACCCATCGGGATTCGACCTTCGC 200
||.|||||..|..||||.|||||.||.||.||..||||||||||.||..|
BL03829___xtm 151 GCTCTTGTCGTAAGGGAAGTGTTTGAAACACACAGGGATTCGACGTTTTC 200
BSNT_02130___ 201 CTTGTT----TCAAGAGGTGATCGAAGAGCTCGGTCTCACAAAGGCCGTG 246
.||.|| ||.| |.|||||.|||||.|||.||..||||||.|
BL03829___xtm 201 TTTATTCGCATCCA----TTATCGATGAGCTGGGTGTCCAAAAGGCGG-- 244
BSNT_02130___ 247 GCATCTC------TTTCTTCCCCGCTGCAGCTGCGATTT-CACAATGGCA 289
||| |||||||.|||.||||..|..|.||| || ||.||||
BL03829___xtm 245 ----CTCAGGCGGTTTCTTCTCCGATGCATATCAGGTTTGCA-AACGGCA 289
BSNT_02130___ 290 GCCGGATCATGTTCAAAGGAATGGACAATCCGGCAAAATTAAAATCGGTT 339
||||.||.||.||.||||||||||||||.|||||.|||||.|||||.||.
BL03829___xtm 290 GCCGAATTATTTTTAAAGGAATGGACAACCCGGCGAAATTGAAATCCGTC 339
BSNT_02130___ 340 CATAACATTTCATTAATATGGATTGAAGAGTGCTCAGAGGTGAAGTATGA 389
.|.|||||.||..|.||.|||||||||||.||.|||||||||||||||||
BL03829___xtm 340 AACAACATCTCGCTGATTTGGATTGAAGAATGTTCAGAGGTGAAGTATGA 389
BSNT_02130___ 390 GGGGTTCAAGGAGTTAATCGGACGTCTTCGCCATCCTGAGCTAAAGCTTC 439
.||.||||||||..|.|||||.||.||..|.||||||.|.|..|.|||..
BL03829___xtm 390 AGGCTTCAAGGAACTGATCGGCCGGCTGAGGCATCCTTATCACAGGCTGT 439
BSNT_02130___ 440 ATATGATCTGTACCACCAATCCCGTCGGCACCTCCAATTGGACGTATAGG 489
|||||||.|..||.||.||.||||||.||...||.||.||||||||.||.
BL03829___xtm 440 ATATGATGTTGACGACAAACCCCGTCAGCCAGTCAAACTGGACGTACAGA 489
BSNT_02130___ 490 CATTTTTTTCGGGATGAACGCAAGAAACGGTTTGTGCTGGATGACAGCGA 539
||.|||||...||||||.||.||.||.|||||..|..||||||| .|.|.
BL03829___xtm 490 CACTTTTTCAAGGATGAGCGGAACAAGCGGTTCATTTTGGATGA-TGAGG 538
BSNT_02130___ 540 ACTT-TACGAAAAGC-GGACGATTGTAAAGGGAGATACGTATTACCATCA 587
.||| ||..|||||| ||.|| .|||....||.||||||||||||||.||
BL03829___xtm 539 TCTTGTATAAAAAGCGGGTCG-CTGTCGTCGGTGATACGTATTACCACCA 587
BSNT_02130___ 588 TTCCACCGCTAACGACAATCTTTTTCTCCCGGAAAGCTATCTGAAACAGC 637
||||||.|||.|.|||||.||.|||.|.|||.|||||||.||.|||||||
BL03829___xtm 588 TTCCACAGCTGATGACAACCTGTTTTTGCCGAAAAGCTACCTCAAACAGC 637
BSNT_02130___ 638 TTGACGGACTCAAAGAGTATGATCCCGACCTGTACCGGATTGCCCGCAAA 687
||||.|...|.||||..|||||||||||||||||||||||||||.|.|||
BL03829___xtm 638 TTGATGATATGAAAGCATATGATCCCGACCTGTACCGGATTGCCAGAAAA 687
BSNT_02130___ 688 GGACGATTCGGCGTCAATGGGATCAGGGTGCTGCCGCAGTTCGAGGTACT 737
||.||.||.||.||.||.||.|.||||||.||||||||.||.||.||..|
BL03829___xtm 688 GGGCGGTTTGGGGTAAACGGCACCAGGGTTCTGCCGCAATTTGAAGTGAT 737
BSNT_02130___ 738 CCCGCATAA-----TCAAATGAAAAAATGTATCGCAGCCATCAGCAAGCC 782
...||||.| || |||| .|||| |||..| |||
BL03829___xtm 738 GGAGCATGAGGAGGTC--ATGA----------GGCAG--ATCTCC--GCC 771
BSNT_02130___ 783 AATCTTTC--------------GTACAGGCATGGATTTTGGATTCGAGGA 818
| |||| |.||.||.||||||||.|||||.|||||
BL03829___xtm 772 A---TTTCCAACCCGCTGAAGAGAACCGGAATGGATTTCGGATTTGAGGA 818
BSNT_02130___ 819 ATCCTATAATGCCGTCGTCCGGCTTGCTGTAGATCCTGAAAAAAAATACC 868
|||.||.|||||||||||||||...||.||.|||||.||.||||||||.|
BL03829___xtm 819 ATCATACAATGCCGTCGTCCGGGCGGCCGTCGATCCCGACAAAAAATATC 868
BSNT_02130___ 869 TCTACATTTATTGGGAGTATTATCAAAACAAAATGACAGATGACAGGACG 918
|.||.||.|||||||||||.||..||||.||||||||||||||.|.||||
BL03829___xtm 869 TATATATCTATTGGGAGTACTACAAAAATAAAATGACAGATGATAAGACG 918
BSNT_02130___ 919 GCTGAGGAGCTGCGTGAGTT---TATTGAGACACAGGAATTGATCAAAGC 965
||.||.||.||.|..||.|| ..|||.|| ||||..||||.|||||
BL03829___xtm 919 GCCGAAGAACTTCACGAATTCGCGGTTGCGA---AGGAGCTGATTAAAGC 965
BSNT_02130___ 966 CGACTCGGCTGAGCCGAAAAGCATTCAATATTTCCGCCAGCAGGGCTTTC 1015
.||..|.||||||||||||||||||||.|.||||.|.|||.|.||.|||.
BL03829___xtm 966 TGATCCCGCTGAGCCGAAAAGCATTCAGTTTTTCAGGCAGAATGGTTTTA 1015
BSNT_02130___ 1016 GGATGGTTGGAGCCAGAAAGTTTCCCGGCTCCAGGCTTCAATATACCAAA 1065
..|||...|.|||..|.|||||.|..|||||..|.||.||||||||.|||
BL03829___xtm 1016 ACATGACAGCAGCACGCAAGTTCCAAGGCTCGCGCCTGCAATATACGAAA 1065
BSNT_02130___ 1066 AAGGTAAAACGGTTCAAAAAAATCTTCTGTTCGGATCGCTGTGAAAATGT 1115
||..|.||.|||||.||||||||.||||||||.||.||.||||..|||..
BL03829___xtm 1066 AAAATCAAGCGGTTTAAAAAAATATTCTGTTCTGACCGATGTGCCAATAC 1115
BSNT_02130___ 1116 CATCTATGAGCTCAAGACACTTACGTATGCCAAAGATAAAAACGGAGCTC 1165
.|||||.||..|..||.|.||.||.|||||.|..|||.||.||||...||
BL03829___xtm 1116 GATCTACGAATTGCAGCCGCTGACCTATGCGACGGATCAAGACGGCAATC 1165
BSNT_02130___ 1166 TGATTGAGGATGAATTCACGATTGACCCGCATACGCTTTCTGCCATTTGG 1215
|||..||||||.|.||.||.|||||.|||||.||||||||.||..|.|||
BL03829___xtm 1166 TGAAGGAGGATCAGTTTACAATTGATCCGCACACGCTTTCCGCGCTATGG 1215
BSNT_02130___ 1216 TATGCGCTTGATGATTATGAGGTTGCTGATATGAA---AGAGACAGCACA 1262
||.|||||||||||||||||.||..|.|||.|||| .|||.|.|.|..
BL03829___xtm 1216 TACGCGCTTGATGATTATGAAGTAACCGATTTGAAGGCTGAGCCGGAAGT 1265
BSNT_02130___ 1263 CAAACGAATCCGGCCGAATCGAGAAAGGAGGAGGTCATAA 1302
.| |||..||||||||..|..|||||.|||| |||.
BL03829___xtm 1266 GA---GAAAACGGCCGAACAGGAAAAGGGGGAG---ATAG 1299
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