Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05856 and BL03866
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence dna-align/BSNT_05856___thiE.1.5803.seq
# -bsequence dna-align/BL03866___thiE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05856___thiE-BL03866___thiE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05856___thiE-BL03866___thiE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05856___thiE
# 2: BL03866___thiE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 706
# Identity: 472/706 (66.9%)
# Similarity: 472/706 (66.9%)
# Gaps: 68/706 ( 9.6%)
# Score: 1415.0
#
#
#=======================================
BSNT_05856___ 1 ATGACTCGTATTTCTCGG--GAAATGATGAAAGAGTTATTATCTGTTTAC 48
|||||.|| ..||||.| |||...||||||||..|.||.||.||.||.
BL03866___thi 1 ATGACGCG--AGTCTCAGAAGAAGCAATGAAAGATCTGTTGTCGGTCTAT 48
BSNT_05856___ 49 TTCATTATGGGGTCAAATAATACGAAAGCCGATCCTGTTACAGTTGTACA 98
||.||||||||||||||.|||||...||..||||||.|.||.|||.|..|
BL03866___thi 49 TTTATTATGGGGTCAAACAATACCGCAGGGGATCCTTTAACTGTTATTGA 98
BSNT_05856___ 99 AAAAGCGTTAAAAGGCGGTGCCACCCTGTACCAGTTCCGTGAAAAAGGCG 148
||||||.||||||||||||||.|||||.|..||.|||||.||||||||||
BL03866___thi 99 AAAAGCTTTAAAAGGCGGTGCGACCCTTTTTCAATTCCGCGAAAAAGGCG 148
BSNT_05856___ 149 GGGATGCGCTGA---CAGGAGAGGCTCGGATTGAATTTGCTGAAAAAGTG 195
.||.||||.||| |.||||| ||..|..|..|||||...|.|.|||
BL03866___thi 149 AGGGTGCGTTGAAAGCCGGAGA---TCAAACGGCGTTTGCCCGACAGGTG 195
BSNT_05856___ 196 CAGGCAGCCTGCCGTGAAGCCGG-----TGTTCCGTTCATTGTCAATGAT 240
||||| ||.|||.|..|.| |||.|||||.|||.||||.|||
BL03866___thi 196 CAGGC-----GCTGTGCAAACAGTTCAATGTACCGTTTATTATCAACGAT 240
BSNT_05856___ 241 GATGTGGAATTGGCTC-TGAAGCTGAAAGCTGACGGTATCCACATCGGCC 289
|||||.|||.|.||.| |||| ||..|.||.||.||..|.||.|||||||
BL03866___thi 241 GATGTAGAACTCGCGCTTGAA-CTTGACGCAGATGGCGTGCATATCGGCC 289
BSNT_05856___ 290 AGGAAGACGCAAACGCGAAAGAGGTAAGAGCTTCCATAGGTGATATGATT 339
||||.||.|..||.||...|||.||.|||||....||.||.||.|..||.
BL03866___thi 290 AGGATGATGATAAGGCCGCAGACGTCAGAGCGAGAATCGGGGACAAAATC 339
BSNT_05856___ 340 CTCGGCGTTTCTGCTCATAC-------GATGTCTGAGGTGAAGCAAGCTG 382
|||||||||||.||.||||| ||.|||| |.||| ||.|
BL03866___thi 340 CTCGGCGTTTCCGCGCATACACTTGAAGAAGTCT----TAAAG---GCGG 382
BSNT_05856___ 383 AAGAAGACGGAGCGGATTATGTCGG-GCTTGGGCCGATCTATCCGACTGA 431
||.|.||.|||||||||||..|||| || .|||||..|.||.||.|||||
BL03866___thi 383 AAAAGGATGGAGCGGATTACATCGGTGC-GGGGCCTGTTTACCCTACTGA 431
BSNT_05856___ 432 AACGAAAAAA----GATACGAGAGCGGTACAAGGGGTATCTCTTATTGAA 477
||| ||| |||||.|.|||.||.||.||.||.||.||.|||.||
BL03866___thi 432 AAC----AAAGCGGGATACAAAAGCTGTGCAGGGCGTCTCGCTCATTCAA 477
BSNT_05856___ 478 GCAG-TTCGCCGCCAAGGCATCAGCATTCCAATTGTCGGCATCGGCGGCA 526
| || |.|||.|.||.||.||..|||||||..|.|||||.||||||||.|
BL03866___thi 478 G-AGATCCGCAGGCAGGGAATTGGCATTCCTGTGGTCGGAATCGGCGGGA 526
BSNT_05856___ 527 TCACAATAGATAA-TGCCGCACCTGTTATCCAAGCGGGGGCCGATGGTGT 575
||||..|.||.|| || ||..||.||.|||.|.||.|||||.||.||..|
BL03866___thi 527 TCACGGTCGAAAACTG-CGTCCCCGTCATCGAGGCCGGGGCGGACGGCAT 575
BSNT_05856___ 576 CAGTATGATCAGCGCCATAAGTCAGGCGGAGGATCCTGAG-AGTGCTGC- 623
||||.|.|||||||||||.||..|.||.|..|||||..|| || ||.||
BL03866___thi 576 CAGTGTCATCAGCGCCATCAGCAAAGCCGCCGATCCAAAGCAG-GCCGCC 624
BSNT_05856___ 624 -ACGCAAGTTTCGGGAGGAAATTCAAACGTATAAAACAGGAAG------- 665
|.|| ||||.|.|| ||||.||.||..||..||||| |||
BL03866___thi 625 GAGGC--GTTTAGCGA-GAAAGTCCAAGCTACCAAACA--AAGCGCACAT 669
BSNT_05856___ 666 --ATAA 669
.|||
BL03866___thi 670 TCCTAA 675
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