Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05813 and BL03895

See Amino acid alignment / Visit BSNT_05813 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence dna-align/BSNT_05813___ung.1.5803.seq
#    -bsequence dna-align/BL03895___ung.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05813___ung-BL03895___ung.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05813___ung-BL03895___ung.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05813___ung
# 2: BL03895___ung
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 682
# Identity:     527/682 (77.3%)
# Similarity:   527/682 (77.3%)
# Gaps:           8/682 ( 1.2%)
# Score: 1986.0
# 
#
#=======================================

BSNT_05813___      1 TTGAAACAGCTTTTACAAGACAGCTGGTGGAATCAGCTAAAGGAAGAGTT     50
                     |||||||||.||||..|.||||||||||||.|.|||||.|||||.|||||
BL03895___ung      1 TTGAAACAGATTTTGAATGACAGCTGGTGGCAACAGCTGAAGGACGAGTT     50

BSNT_05813___     51 TGAGAAACCGTATTATCAAGAGCTCAGAGAAATGCTGAAGCGGGAATACG    100
                     |||.||.||.|||||||||||.||.||.|||||||||||..||||.||.|
BL03895___ung     51 TGATAAGCCTTATTATCAAGAACTGAGGGAAATGCTGAAAAGGGAGTATG    100

BSNT_05813___    101 CGGAGCAAACGATTTATCCGGACAGCCG--GGATATTTTCAATGCGCTGC    148
                     |.||.||.||..|.|||||.|  |.|||  .|||||.|.||||||..|||
BL03895___ung    101 CTGAACACACCGTATATCCTG--AACCGAACGATATATACAATGCTTTGC    148

BSNT_05813___    149 ATTATACATCATATGATGATGTCAAGGTCGTCATTCTGGGACAAGATCCG    198
                     |||||||.||.|||||..||||.||.|||||.|||||.||.|||||.|||
BL03895___ung    149 ATTATACTTCCTATGAAAATGTGAAAGTCGTAATTCTCGGCCAAGACCCG    198

BSNT_05813___    199 TATCACGGGCCGGGACAGGCTCAAGGTTTAAGCTTCTCTGT-CAAGCCCG    247
                     ||||||||.|||||.|||||.||.||.|||||.||.||.|| ||| ||||
BL03895___ung    199 TATCACGGTCCGGGTCAGGCCCATGGCTTAAGTTTTTCCGTACAA-CCCG    247

BSNT_05813___    248 GTGTAAAGCAGCCGCCTTCGTTAAAAAATATTTTTCTTGAGCTGCAGCAG    297
                     |.||.||.|..||||||||.||.||||||||||||.|.||..|||||.|.
BL03895___ung    248 GCGTCAATCCACCGCCTTCTTTGAAAAATATTTTTATAGAATTGCAGAAT    297

BSNT_05813___    298 GATATCGGGTGCAG-CATCCCGAATCACGGGTCGCTTGTGAGCTGGGCAA    346
                     ||.||| ||.||.| |||||||||||||||.||.||.||.||||||||.|
BL03895___ung    298 GACATC-GGCGCCGACATCCCGAATCACGGTTCTCTCGTCAGCTGGGCTA    346

BSNT_05813___    347 AGCAAGGCGTTCTTTTGCTGAATACTGTGCTGACAGTAAGGCGCGGACAG    396
                     |||||||||||||..|||||||.||.||..||||.||.||.||.||.|||
BL03895___ung    347 AGCAAGGCGTTCTGCTGCTGAACACCGTTTTGACCGTGAGACGGGGCCAG    396

BSNT_05813___    397 GCGAATTCCCATAAGGGAAAAGGCTGGGAGCGACTGACGGACCGAATTAT    446
                     ||.|||||.|||||.||.|||||||||||.|..||.||.||..|.||.||
BL03895___ung    397 GCAAATTCGCATAAAGGGAAAGGCTGGGAACAGCTCACAGATAGTATAAT    446

BSNT_05813___    447 TGACGTGCTGAGTGAAAGAGAGCGGCCGGTTATCTTTATTTTGTGGGGAC    496
                     .||.||..|.|...|||||||....|||||..|.||||||.|.|||||.|
BL03895___ung    447 AGATGTTTTAAACAAAAGAGACAAACCGGTCGTTTTTATTCTCTGGGGCC    496

BSNT_05813___    497 GGCATGCTCAAATGAAAAAAGAACGGATCGACACCTCCAAGCATTTTATC    546
                     |||||||.|||||||||||||||||.|||||.||.||||||||||||||.
BL03895___ung    497 GGCATGCCCAAATGAAAAAAGAACGAATCGATACATCCAAGCATTTTATT    546

BSNT_05813___    547 ATTGAATCGACGCATCCCAGCCCGTTTTCTGCGAGAAACGGATTTTTCGG    596
                     ||..|||||.|||||||.||||||||.||.||.||||||||.||||||||
BL03895___ung    547 ATCCAATCGCCGCATCCGAGCCCGTTCTCGGCTAGAAACGGGTTTTTCGG    596

BSNT_05813___    597 GAGCAGACCGTTTTCCCGGGCGAATGCCTATTTGGAGAAAATGGGAGAGG    646
                     |||||||||||||||..|.||.|||...||||||||..||||.||.||.|
BL03895___ung    597 GAGCAGACCGTTTTCAAGAGCCAATCAGTATTTGGAACAAATCGGGGATG    646

BSNT_05813___    647 CGCCGATTGATTGGTGTATTAAGGATTTGTAA    678
                     .|||||||||.||||...||..|.||.|.|||
BL03895___ung    647 AGCCGATTGACTGGTCCCTTCCGAATCTTTAA    678


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