Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05763 and BL03905

See Amino acid alignment / Visit BSNT_05763 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:52
# Commandline: needle
#    -asequence dna-align/BSNT_05763___eutD.1.5803.seq
#    -bsequence dna-align/BL03905___eutD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05763___eutD-BL03905___eutD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05763___eutD-BL03905___eutD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05763___eutD
# 2: BL03905___eutD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 974
# Identity:     806/974 (82.8%)
# Similarity:   806/974 (82.8%)
# Gaps:           4/974 ( 0.4%)
# Score: 3334.0
# 
#
#=======================================

BSNT_05763___      1 GTGGCAGATTTATTTTCAACAGTGCAAGAAAAAGTAGCTGGAAAAGACGT     50
                     |||||||||.|||||.||||||||||.|.|||||||||.|||||||..||
BL03905___eut      1 GTGGCAGATCTATTTACAACAGTGCAGGGAAAAGTAGCAGGAAAAGGAGT     50

BSNT_05763___     51 TAAAATTGTATTTCCTGAAGGCTTAGACGAGCGTATT-TTAGAAGCGGTC     99
                     ||||||.||||||||.|||||.||.|||||||||||| ||| .|||.|||
BL03905___eut     51 TAAAATCGTATTTCCGGAAGGTTTGGACGAGCGTATTCTTA-CAGCTGTC     99

BSNT_05763___    100 AGCAAGCTTGCAGGAAACAAAGTGCTGAATCCGATTGTGATCGGCAATGA    149
                     |.|||..|.||.||||||||.|||.|.||.|||||..|..|.||.||.||
BL03905___eut    100 AACAAATTGGCCGGAAACAACGTGTTAAAGCCGATCCTTGTAGGAAACGA    149

BSNT_05763___    150 AAATGAGATCCAAGCAAAAGCAAAAGAATTGAACCTTACGCTGGACGGCG    199
                     ..|.||.|||.|||..||||||||.|..|||||..|.||||||||.||||
BL03905___eut    150 GCAGGAAATCAAAGATAAAGCAAACGGGTTGAATTTAACGCTGGATGGCG    199

BSNT_05763___    200 TTAAGATTTATGATCCTCATACATATGAAGGCATGGAAGACCTTGTACAA    249
                     ||.|.||.||.||||||||||||||||||||.||||||||||||||.||.
BL03905___eut    200 TTGACATATACGATCCTCATACATATGAAGGGATGGAAGACCTTGTTCAG    249

BSNT_05763___    250 GCATTCGTAGAACGCCGCAAAGGCAAAGCGACAGAAGAACAGGCTCG-CA    298
                     ||.|||||.|||||||||||||||||||||||.|||||.|||||.|| ||
BL03905___eut    250 GCTTTCGTTGAACGCCGCAAAGGCAAAGCGACGGAAGAGCAGGCCCGCCA    299

BSNT_05763___    299 AAGCGTTATTAGACGAGAACTACTTCGGTACAATGCTGGTGTATAAAGGA    348
                     ||.|.|| ||||||||.||||||||.||.||.|||||.||.||||||||.
BL03905___eut    300 AATCCTT-TTAGACGAAAACTACTTTGGAACGATGCTTGTTTATAAAGGG    348

BSNT_05763___    349 CTTGCAGACGGACTTGTAAGCGGAGCTGCTCACTCAACTGCTGACACTGT    398
                     |||||.|||||.|||||.|||||.||.|||||.|||||.||.||.||.||
BL03905___eut    349 CTTGCCGACGGCCTTGTCAGCGGTGCGGCTCATTCAACAGCGGATACGGT    398

BSNT_05763___    399 CCGCCCGGCTCTTCAAATCATCAAAACAAAAGAAGGCGTGAAAAAGACTT    448
                     .||||||||.||.|||||.||.||||||||||||||||||||.||.||.|
BL03905___eut    399 TCGCCCGGCGCTGCAAATTATTAAAACAAAAGAAGGCGTGAAGAAAACAT    448

BSNT_05763___    449 CCGGCGTGTTCATCATGGCTCGCGGAGAAGAGCAATACGTATTCGCAGAT    498
                     |.|||||.||.||||||||.|||||.||.|||||.||||||||||||||.
BL03905___eut    449 CAGGCGTCTTTATCATGGCGCGCGGCGATGAGCAGTACGTATTCGCAGAC    498

BSNT_05763___    499 TGCGCGATCAACATTGCGCCTGACAGCCAAGATCTTGCCGAGATTGCGAT    548
                     ||.||||||||||||||||||||||||||.||.|||||.||.||.||.||
BL03905___eut    499 TGTGCGATCAACATTGCGCCTGACAGCCAGGACCTTGCGGAAATCGCAAT    548

BSNT_05763___    549 CGAAAGTGCCAATACGGCAAAAATGTTCGACATTGAGCCTCGCGTGGCAA    598
                     |||||||||.||.||.||.||||||||||||||.||.|||||.||.||.|
BL03905___eut    549 CGAAAGTGCGAACACAGCGAAAATGTTCGACATCGAACCTCGTGTCGCCA    598

BSNT_05763___    599 TGCTCAGCTTCTCTACAAAAGGCTCAGCAAAATCTGATGAAACAGAAAAA    648
                     ||||||||||.||.||||||||.||.||||||||.||.|||||.||||||
BL03905___eut    599 TGCTCAGCTTTTCAACAAAAGGTTCGGCAAAATCAGACGAAACTGAAAAA    648

BSNT_05763___    649 GTAGCGGATGCAGTGAAAATCGCGAAAGAAAAAGCGCCTGAACTGACACT    698
                     |||||..|.||.||...||||||.|||||||||||||||||.||.|||||
BL03905___eut    649 GTAGCCAACGCGGTTGCAATCGCAAAAGAAAAAGCGCCTGAGCTTACACT    698

BSNT_05763___    699 TGACGGCGAATTCCAATTTGATGCTGCATTTGTTCCATCTGTAGCTGAGA    748
                     |||||||||||||||||||||.||.|||||.|||||.|||||.|||||||
BL03905___eut    699 TGACGGCGAATTCCAATTTGACGCGGCATTCGTTCCGTCTGTCGCTGAGA    748

BSNT_05763___    749 AAAAAGCGCCGGATTCCGAAATCAAAGGGGACGCTAACGTATTCGTATTC    798
                     |||||||||||||.||||..||.|||||.||.||.||||||||.||.|||
BL03905___eut    749 AAAAAGCGCCGGACTCCGTCATTAAAGGAGATGCAAACGTATTTGTTTTC    798

BSNT_05763___    799 CCAAGCCTTGAAGCAGGAAACATCGGCTATAAAATCGCTCAGCGTTTGGG    848
                     ||||||||||||||.||.||.|||||||||||||||||||||||..|.||
BL03905___eut    799 CCAAGCCTTGAAGCGGGGAATATCGGCTATAAAATCGCTCAGCGCCTCGG    848

BSNT_05763___    849 CAACTTTGAAGCGGTAGGTCCAATCCTGCAAGGTTTAAATATGCCTGTAA    898
                     |||||||||||||||.|||||.||.||||||||..|.||.||||||||||
BL03905___eut    849 CAACTTTGAAGCGGTCGGTCCGATTCTGCAAGGGCTGAACATGCCTGTAA    898

BSNT_05763___    899 ACGACCTTTCAAGAGGATGTAACGCTGAAGATGTTTACAATCTCGCATTA    948
                     |||||||.||.|||||.||.||||||||.||.|||||.|||||.||..|.
BL03905___eut    899 ACGACCTGTCCAGAGGGTGCAACGCTGAGGACGTTTATAATCTTGCGCTG    948

BSNT_05763___    949 ATTACAGCGGCGCAAGCACTGTAA    972
                     |||||.|||||.|||||.||||||
BL03905___eut    949 ATTACGGCGGCTCAAGCTCTGTAA    972


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