Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05893 and BL03932
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence dna-align/BSNT_05893___dltC.1.5803.seq
# -bsequence dna-align/BL03932___dltC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05893___dltC-BL03932___dltC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05893___dltC-BL03932___dltC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05893___dltC
# 2: BL03932___dltC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 189/240 (78.8%)
# Similarity: 189/240 (78.8%)
# Gaps: 6/240 ( 2.5%)
# Score: 705.0
#
#
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BSNT_05893___ 1 ATGGATTTTAAACAAGAGGTA-TTAGACGTTTTAGCAGAGGTTTGCCAGG 49
|||||||||||.|||||.||| ||..| ||||||||||||||.||.||||
BL03932___dlt 1 ATGGATTTTAATCAAGAAGTACTTTCA-GTTTTAGCAGAGGTATGTCAGG 49
BSNT_05893___ 50 ATGACATCGTAAAGGAAAATCCTGATATTGAAATTTTTGAAGAAGGTTTG 99
|.||.|||||||||||||||||.||||||||.||.||.|||||.||..|.
BL03932___dlt 50 ACGATATCGTAAAGGAAAATCCGGATATTGATATATTCGAAGAGGGAATC 99
BSNT_05893___ 100 CTTGATTCTTTTGGAACAGTAGAATTGCTGCTTGCGATT-GAAAACCGTT 148
||.|||||.||.||.||.||.|||||||||||.|| ||| ||||.||.||
BL03932___dlt 100 CTCGATTCCTTCGGCACGGTGGAATTGCTGCTCGC-ATTCGAAAGCCATT 148
BSNT_05893___ 149 TTGATATTTTAGTGCCGATCACTGAATTTGACCGGGACGTTTGGAATACA 198
||.|.||...|||||||||.||.||.|||||||||||.|..|||||.||.
BL03932___dlt 149 TTAACATCACAGTGCCGATTACAGAGTTTGACCGGGATGCATGGAACACG 198
BSNT_05893___ 199 CCTAA-CAACATTGTAAATCAGCTGTCTGAGTTGAAATAA 237
||.|| ||| ||..||||.||||||..||||||||.||||
BL03932___dlt 199 CCAAATCAA-ATCATAAAGCAGCTGAATGAGTTGAGATAA 237
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