Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05892 and BL03933

See Amino acid alignment / Visit BSNT_05892 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:58
# Commandline: needle
#    -asequence dna-align/BSNT_05892___dltB.1.5803.seq
#    -bsequence dna-align/BL03933___dltB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05892___dltB-BL03933___dltB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05892___dltB-BL03933___dltB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05892___dltB
# 2: BL03933___dltB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1229
# Identity:     864/1229 (70.3%)
# Similarity:   864/1229 (70.3%)
# Gaps:         112/1229 ( 9.1%)
# Score: 2929.0
# 
#
#=======================================

BSNT_05892___      1 ATGACGCCTTACAGCTCGT---TTTTATTCTTTATACTGCTT-GGCATTC     46
                     |||||||||||..|.||.|   ||||.|||.|||||    || ||.|||.
BL03933___dlt      1 ATGACGCCTTATGGTTCATTTCTTTTCTTCATTATA----TTAGGAATTT     46

BSNT_05892___     47 TTCTTCTGCCGACGATCATTCTCGGCTTAAACGGAAAAAGATTTCAAGC-     95
                     |.||...||||||.|||||||||||..|.|||||||||||.||.|  || 
BL03933___dlt     47 TACTGGCGCCGACCATCATTCTCGGACTGAACGGAAAAAGCTTCC--GCT     94

BSNT_05892___     96 -ATACAACATG-----TTCATATCT--ATCATTATATTGGCTTTAATTTT    137
                      |||.||.|||     |||...|||  .||       ||||..|.|||||
BL03933___dlt     95 TATATAATATGGCGGTTTCCGTTCTGGTTC-------TGGCGCTTATTTT    137

BSNT_05892___    138 TTCGCACGACTTACACGGGGTCATCGCGCTGTGCCTGTTTACAATATGGC    187
                     ||||.||..|.|.||||||.|.|||..|||||||||||||||..|.||||
BL03933___dlt    138 TTCGAACAGCCTGCACGGGCTGATCATGCTGTGCCTGTTTACGCTTTGGC    187

BSNT_05892___    188 AGGTGCTCCTGATCAGCGGCTATCTGGCATACCGGCAGAAAGCGAACAGC    237
                     ||..|.|.|||||||..||||||.|.||.|||||.|..||||||||||||
BL03933___dlt    188 AGACGGTTCTGATCAAAGGCTATATCGCTTACCGTCTAAAAGCGAACAGC    237

BSNT_05892___    238 GGCTTTGTCTTTTGCGGGGCTGTTATC-GCGTCTATTCTGCCTTTATTTC    286
                     |||.|.||.|||||...||||| .|.| ||.|||||.|||||      ||
BL03933___dlt    238 GGCATCGTATTTTGTCTGGCTG-CAGCAGCTTCTATCCTGCC------TC    280

BSNT_05892___    287 TGTCAAAAATATGGCCGTTTCTGTCACACCCGCAGCCGCATCATCCGCCG    336
                     ||.||               ||||||.|.|.||.||||  |..|.|||||
BL03933___dlt    281 TGGCA---------------CTGTCAAAGCTGCTGCCG--TTTTTCGCCG    313

BSNT_05892___    337 CATAAC--CTGATCAGC-TTTTTAGGGATTTCATATTTAACCTTTAAAGG    383
                      .|.||  |||..||.| |||.|.||.||.||.||||||||.||||||||
BL03933___dlt    314 -TTGACAACTGGGCAACATTTCTCGGAATCTCGTATTTAACTTTTAAAGG    362

BSNT_05892___    384 CGTTCAGCTGATTATGGAAGCAAGAGACGGACTGCTGAAAGAACAGCTGC    433
                     .||||||||.||.||.|||.|..|.|||||.||..|.|||.|.|||||.|
BL03933___dlt    363 GGTTCAGCTCATCATTGAAACCCGCGACGGTCTCATTAAAAAGCAGCTCC    412

BSNT_05892___    434 CATT--GCACCGCCTGCTGTATTTCATCCTGTTTTTCCCGACGATTTCCT    481
                     ||.|  |||  |.|||||.||.||.||.||.|||||.||.||.||.||.|
BL03933___dlt    413 CAATCAGCA--GACTGCTTTACTTTATTCTCTTTTTTCCAACCATCTCGT    460

BSNT_05892___    482 CCGGCCCGATCGACAGATACCGCCGGTTCGTCAAGGATGAACAGAAGGCT    531
                     |.||.|||||||||||.||||||||.||.|..||.||.||.||||.||.|
BL03933___dlt    461 CAGGTCCGATCGACAGGTACCGCCGTTTTGAAAAAGACGATCAGACGGTT    510

BSNT_05892___    532 TGGACGAAAGAAG-AATACGCCGACCTGTTGTATACGGGAATCCATAAAA    580
                     ||||| ||||.|| ||||||..||.|||.|.||.|..||||||.||||||
BL03933___dlt    511 TGGAC-AAAGGAGCAATACGAAGAACTGCTTTACAAAGGAATCAATAAAA    559

BSNT_05892___    581 TCTTCATCGGTTTCCTGTATAAATTTATTATCGGCTAC-GCGATCAATAC    629
                     |.||..||||.||..||||.|||||.|||||||||||| || ||.|||||
BL03933___dlt    560 TTTTTCTCGGCTTTTTGTACAAATTCATTATCGGCTACTGC-ATTAATAC    608

BSNT_05892___    630 GTACTTCATCATGAA-------------TCTTCCCGCA--ATCACGCACA    664
                     |||..||||.|||||             .|||||.|||  .||.||||  
BL03933___dlt    609 GTATGTCATAATGAAACTGCCGTTTTTGACTTCCGGCAGCTTCTCGCA--    656

BSNT_05892___    665 ATAAGATTCTTGGGAACCTGCTGTACATGTACGGCTACAGCATGTATTTA    714
                       ..||||    ||.|       ||||||||.|..||||||.|.|||.|.
BL03933___dlt    657 --TGGATT----GGCA-------TACATGTATGCGTACAGCCTTTATCTG    693

BSNT_05892___    715 TTCTTTGATTTCGCCGGCTACACGATGTTTGCCGTCGGGGTCAGCTACAT    764
                     ||.||||||||||||||.||||||...|||||.|||||.||||||||.||
BL03933___dlt    694 TTTTTTGATTTCGCCGGATACACGGCTTTTGCGGTCGGCGTCAGCTATAT    743

BSNT_05892___    765 TATGGGCATTAAATCACCGGAAAACTTTAATAAACCATTTATCAGTAAAA    814
                     .|||||.||.|||||.||.||||||||||||||.||.||.|||||....|
BL03933___dlt    744 CATGGGAATCAAATCCCCTGAAAACTTTAATAAGCCGTTCATCAGCCGCA    793

BSNT_05892___    815 ATATTAAAGATTTCTGGAATCGCTGGCATATGTCTCTGTCATTTTGGTTC    864
                     |||||||||||||||||||.||||||||||||||.||.||.||.||||||
BL03933___dlt    794 ATATTAAAGATTTCTGGAACCGCTGGCATATGTCGCTTTCCTTCTGGTTC    843

BSNT_05892___    865 AGAGATTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTG    914
                     |||||.||.||.||.|||.|.||.||..||||||||||.||||||||.||
BL03933___dlt    844 AGAGACTACGTCTTCATGCGCTTTGTCCTTTGGATGACGAAGAAAAAATG    893

BSNT_05892___    915 GATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTA    964
                     |||||.||||||.|||||.||.||.||.|||||.|||.|.||||||||..
BL03933___dlt    894 GATCACAAACCGGATGGCTGTTTCCAATATCGGATATGTGCTGCTGTTCC    943

BSNT_05892___    965 TGCTGATGGGGGTTTGGCACGGGCTTGCGCCGCAATATATCATTTACGGC   1014
                     |.||||||||.||.||||||||.|||||.||.||.||.|||.|.|||||.
BL03933___dlt    944 TTCTGATGGGCGTCTGGCACGGCCTTGCCCCTCAGTACATCGTCTACGGG    993

BSNT_05892___   1015 CTCTATCACGCCGTTCTGATGACGT--GTTACAACTTTTTCGAGAAGTGG   1062
                     ||.||||||||..|.||.|||  ||  |.|..|||||.||.||.||.|||
BL03933___dlt    994 CTGTATCACGCGCTGCTCATG--GTCGGCTTTAACTTCTTTGAAAAATGG   1041

BSNT_05892___   1063 AATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAAC--CATTCTC   1110
                     ||||||||..|.||.|||..||||..||||...|||||.||  |..||| 
BL03933___dlt   1042 AATAAGAAGCACAAGTGGTGGCCGAACAACAAGTGGACGACAGCCGTCT-   1090

BSNT_05892___   1111 GCTATTGTGATCACATTCCATTTCGTTTGCTTCGGGTTTTATATTTTCTC   1160
                      |.||||||.|.||.|||||.||.||.||.||.||.||||..||||||||
BL03933___dlt   1091 -CAATTGTGGTGACCTTCCACTTTGTATGTTTTGGATTTTTAATTTTCTC   1139

BSNT_05892___   1161 AGGAAAACCATTTCAT-CACCACCATTAA   1188
                     |||.||||    |.|| |||      |||
BL03933___dlt   1140 AGGGAAAC----TAATACAC------TAA   1158


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