Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00932 and BL03937

See Amino acid alignment / Visit BSNT_00932 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence dna-align/BSNT_00932___ydfI.1.5803.seq
#    -bsequence dna-align/BL03937___ydfI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00932___ydfI-BL03937___ydfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00932___ydfI-BL03937___ydfI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00932___ydfI
# 2: BL03937___ydfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity:     593/642 (92.4%)
# Similarity:   593/642 (92.4%)
# Gaps:           3/642 ( 0.5%)
# Score: 2770.0
# 
#
#=======================================

BSNT_00932___      1 ATGAATAAGGTTTTAATCGTTGATGACCATCTTGTCGTGAGGGAAGGTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL03937___ydf      1 ATGAATAAGGTTTTAATCGTTGATGACCATCTTGTCGTGAGGGAAGGTCT     50

BSNT_00932___     51 GAAGCTTTTAATTGAAACGAATGATCAATACACCATTATAGGAGAGGCGG    100
                     |||||||||||||||||||||||||||.||||.|||.|||||||||||||
BL03937___ydf     51 GAAGCTTTTAATTGAAACGAATGATCACTACATCATCATAGGAGAGGCGG    100

BSNT_00932___    101 AAAATGGAAAAGTCGCAGTCCGTCTTGCAGATGAATTAGAACCGGATATC    150
                     |||||||.||||..|||||.||.|||||||||||||||.||||||||||.
BL03937___ydf    101 AAAATGGCAAAGCAGCAGTTCGCCTTGCAGATGAATTAAAACCGGATATT    150

BSNT_00932___    151 ATTCTGATGGATTTGTATATGCCGGAGATGAGCGGGTTAGAGGCCATTAA    200
                     |||||.|||||||||||||||||||||||||||||||||||.||||||||
BL03937___ydf    151 ATTCTCATGGATTTGTATATGCCGGAGATGAGCGGGTTAGAAGCCATTAA    200

BSNT_00932___    201 ACAAATAAAAGAAAAACACGATACCCCCATCATTATTTTGACTACATATA    250
                     ||.||||||||||||||||||.|.|||||||||||||||||||||.||||
BL03937___ydf    201 ACTAATAAAAGAAAAACACGACATCCCCATCATTATTTTGACTACGTATA    250

BSNT_00932___    251 ATGAAGATCACTTAATGATCGAAGGGATTGAATTAGGAGCGAAAGGATAT    300
                     |||||||||||||||||||||||||.|||||||||||.||||||||||||
BL03937___ydf    251 ATGAAGATCACTTAATGATCGAAGGAATTGAATTAGGGGCGAAAGGATAT    300

BSNT_00932___    301 CTGTTAAAGGATACGAGTTCAGAAACCCTTTTTCACACAATGGATGCAGC    350
                     ||.||.||||||||.||||||||||||||||||||.||.|||||.|||||
BL03937___ydf    301 CTATTGAAGGATACAAGTTCAGAAACCCTTTTTCATACGATGGACGCAGC    350

BSNT_00932___    351 GATCAGAGGAAATGTGCTGTTGCAGCCTGATATCCTCAAACGTCTGCAAG    400
                     .||.||||||||.|||||.|||||||||||||||.|.|||||||||||||
BL03937___ydf    351 AATAAGAGGAAACGTGCTATTGCAGCCTGATATCTTAAAACGTCTGCAAG    400

BSNT_00932___    401 AAATCCAATTTGAGCGGATGAAAAAGCAGCGCAGTGAGACGCAGCTGACG    450
                     ||||||||||.|||||||||||.||||||.|||||||.|||||||||||.
BL03937___ydf    401 AAATCCAATTGGAGCGGATGAAGAAGCAGAGCAGTGATACGCAGCTGACA    450

BSNT_00932___    451 GAAAAGGAAGTCATTGTTCTAAAAGCAATTGCTAAAGGTCTTAAAAGCAA    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BL03937___ydf    451 GAAAAGGAAGTCATAGTTCTAAAAGCAATTGCTAAAGGTCTTAAAAGCAA    500

BSNT_00932___    501 AGCGATTGCCTTTGATTTGGACGTCTCTGAGCGAACAGTAAAGTCCAGAT    550
                     ||||||||||||||||||||.||||||||||.|||||||||||||.|||.
BL03937___ydf    501 AGCGATTGCCTTTGATTTGGGCGTCTCTGAGAGAACAGTAAAGTCTAGAC    550

BSNT_00932___    551 TAACGTCCATTTACAATAAATTAGGCGCGAATTCAAGAACTGAGGCAGTA    600
                     |||||||||||||||||||||||||||||||||||||||||||.|||||.
BL03937___ydf    551 TAACGTCCATTTACAATAAATTAGGCGCGAATTCAAGAACTGAAGCAGTG    600

BSNT_00932___    601 ACGATTGCCATGCAAAAAGGTATTCTGACAATAGACAACTAA    642
                     ||||||||||||||||.|||..||||||||.|||   |||||
BL03937___ydf    601 ACGATTGCCATGCAAAGAGGCGTTCTGACATTAG---ACTAA    639


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