Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05673 and BL03968

See Amino acid alignment / Visit BSNT_05673 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:47
# Commandline: needle
#    -asequence dna-align/BSNT_05673___spo0F.1.5803.seq
#    -bsequence dna-align/BL03968___spo0F.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05673___spo0F-BL03968___spo0F.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05673___spo0F-BL03968___spo0F.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05673___spo0F
# 2: BL03968___spo0F
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity:     306/378 (81.0%)
# Similarity:   306/378 (81.0%)
# Gaps:           6/378 ( 1.6%)
# Score: 1266.0
# 
#
#=======================================

BSNT_05673___      1 ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTAT     50
                        ||||||||.||.|||||||||||.||.||.||.|||||.|||||..|
BL03968___spo      1 ---ATGAATGAGAAGATTTTAATCGTAGACGACCAGTACGGGATTCGGGT     47

BSNT_05673___     51 TTTGCTAAATGAAGTGTTCAATAAAGAAGGCTACCAGACGTTTCAGGCTG    100
                     |.||||.||||||||.||||||||||||||.|||.|.||.||.|||||.|
BL03968___spo     48 TCTGCTGAATGAAGTTTTCAATAAAGAAGGGTACAAAACCTTCCAGGCCG     97

BSNT_05673___    101 CGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTT    150
                     |.|||||..|.||.||||||||||||||||.|||..|.||.||||||||.
BL03968___spo     98 CAAACGGGATTCAAGCGCTTGACATTGTGAAAAACCAGCGCCCCGACCTC    147

BSNT_05673___    151 GTGCTTTTGGACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAA    200
                     ||.||..|.||.||||||||.|||||.|||||||||||.|||||.|||||
BL03968___spo    148 GTTCTGCTCGATATGAAAATCCCCGGAATGGACGGAATTGAAATTTTAAA    197

BSNT_05673___    201 ACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATCATGACGGCAT    250
                     |.|.||||||.||||.|||||....|||||.|||||.|||||||||||.|
BL03968___spo    198 AAGAATGAAGATCATAGACGAGGGGATCCGCGTCATCATCATGACGGCCT    247

BSNT_05673___    251 ACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACG    300
                     ||||||||||||||||||||||.|||||||||||..|.||.||||||||.
BL03968___spo    248 ACGGAGAGCTCGACATGATCCAGGAATCGAAGGAGCTCGGAGCCCTGACA    297

BSNT_05673___    301 CACTTTGCCAAGCCGTTTGACATCGACGAAATCAGAGACGCCGTCAAAAA    350
                     ||||||||.|||||.||||||||||||||||||.|.||.||||||||||.
BL03968___spo    298 CACTTTGCTAAGCCTTTTGACATCGACGAAATCCGCGATGCCGTCAAAAC    347

BSNT_05673___    351 ATATCTGCCCCTGAAGTCTAACTGA---    375
                     .|||||||||.|.|||||.|||.||   
BL03968___spo    348 GTATCTGCCCATAAAGTCCAACGGATAG    375


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