Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05666 and BL03971
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:46
# Commandline: needle
# -asequence dna-align/BSNT_05666___murAB.1.5803.seq
# -bsequence dna-align/BL03971___murAB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05666___murAB-BL03971___murAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05666___murAB-BL03971___murAB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05666___murAB
# 2: BL03971___murAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1311
# Identity: 987/1311 (75.3%)
# Similarity: 987/1311 (75.3%)
# Gaps: 42/1311 ( 3.2%)
# Score: 3567.5
#
#
#=======================================
BSNT_05666___ 1 ATGGAAAAGTTGAATATTGCCGGCGGTGA--CTCGTTAAACGGTACAGTA 48
|||||||||||.|||||.||.|||||.|| ||| |.||.||.||||||
BL03971___mur 1 ATGGAAAAGTTAAATATAGCTGGCGGCGATCCTC--TCAATGGCACAGTA 48
BSNT_05666___ 49 CATATCAGCGGCGCTAAAAACAGCGCTGTTGCGTTAATACCTGCAACCAT 98
|||||.|||||.||.||||||||||||||.||..|.||||||||.||.||
BL03971___mur 49 CATATAAGCGGAGCGAAAAACAGCGCTGTCGCTCTCATACCTGCGACGAT 98
BSNT_05666___ 99 TTTGGCAAATTCCGA-GGTGACAATTGAAGGGCTTCCAGAGATTTCAGAT 147
||||||..||| ||| |||.||..|||||||.|||||..|.||||||||.
BL03971___mur 99 TTTGGCTGATT-CGACGGTTACGCTTGAAGGCCTTCCCCATATTTCAGAC 147
BSNT_05666___ 148 ATTGAAACGCTGCGTGACCTGTTAAAGGAAATCGGCGGCAACGTGCATTT 197
|||...|||||.||.||.|||.|.|..||.||||||||.|||||.||.||
BL03971___mur 148 ATTTTGACGCTTCGCGATCTGCTGAGAGAGATCGGCGGAAACGTTCACTT 197
BSNT_05666___ 198 TGAGAATGGGGAAATGGTTGTTGACCCTACGTCGATGATCAGCATGCCGC 247
|||.||.||.||||||||.|||||.|||.||.||||||||||||||||..
BL03971___mur 198 TGAAAAGGGAGAAATGGTCGTTGATCCTGCGCCGATGATCAGCATGCCTT 247
BSNT_05666___ 248 TTCCTAACGGGAAAGTAAAAAAGCTTCGCGCGTCATATTATTTAATGGGG 297
|.||.||.||.|||||.|||.|||||||.||.||.|||||.||||||||.
BL03971___mur 248 TGCCGAATGGAAAAGTGAAACAGCTTCGGGCTTCTTATTACTTAATGGGC 297
BSNT_05666___ 298 GCGATGCTCGGCCGCTTCAAGCAGGCGGTCATTGGATTGCCTGGCGGCTG 347
||||||||.||.|||||.|||.|.||||||||.||..|.||.||||||||
BL03971___mur 298 GCGATGCTAGGACGCTTTAAGAAAGCGGTCATCGGCCTTCCAGGCGGCTG 347
BSNT_05666___ 348 TCACTTAGGGCCCCGTCCGATTGATCAGCATATCAAAGGCTTTGAAGCAC 397
.|||.|.||.||..|.|||||||||||||||||||||||.|||||.||.|
BL03971___mur 348 CCACCTTGGTCCGAGACCGATTGATCAGCATATCAAAGGTTTTGAGGCGC 397
BSNT_05666___ 398 TCGGAGCTGAAGTAACCAATGAACAAGGCGCCATTTATTTGCGAGCTGAA 447
|||||||.|||||.||.||.|||||.||.||.||.|||.||||.||.|
BL03971___mur 398 TCGGAGCCGAAGTGACAAACGAACAGGGTGCGATCTATCTGCGTGCGG-- 445
BSNT_05666___ 448 AGG--CTGAGAGGCGCACGGATTTATTTAGATGTCGTTAGCGTTGGGGCA 495
||| .|.|.||||||.||.||||||.|.||||||||.||.|||||.|||
BL03971___mur 446 AGGAATTAAAAGGCGCGCGCATTTATCTTGATGTCGTCAGTGTTGGAGCA 495
BSNT_05666___ 496 ACGATTAACATTATGCTCGCCGCTGT-TTTGGCAGAAGGGAAAACGATCA 544
|||||.|||||.|||||.|||||.|| .|||.|| ||||.|.|||..|.|
BL03971___mur 496 ACGATCAACATCATGCTTGCCGCCGTGCTTGCCA-AAGGCAGAACCGTAA 544
BSNT_05666___ 545 TCGAAAACGCTGCCAAGGAGCCTGAGATCATTGACGTCGCGACATTGCTT 594
|.|||||||||||.||.||.||||||||.||.||.||.||.||..|..|.
BL03971___mur 545 TTGAAAACGCTGCGAAAGAACCTGAGATTATCGATGTTGCCACTCTTTTA 594
BSNT_05666___ 595 ACCAGCATGGGCGCCAAAATCAAAGGTGCGGGCACCAATGTGATTCGAAT 644
||.||||||||.||.|||||.|||||.||.||.||..|.||.||.||.||
BL03971___mur 595 ACAAGCATGGGAGCAAAAATAAAAGGCGCCGGTACGGACGTCATCCGCAT 644
BSNT_05666___ 645 CGACGGCGTGAAGGAA---CTGCACGGCTGCAAGCATACGATCATTCCGG 691
|||.||||| .||| ||.|||||.||||..||..||||.|||||||
BL03971___mur 645 CGAAGGCGT---TGAATCGCTTCACGGGTGCAGACACTCGATTATTCCGG 691
BSNT_05666___ 692 ACAGAATTGAGGCCGGGACATTTATGATTGCAGGGGCTGCAATGGG-CAA 740
||.|.||.||.|||||.||.||.||||||||||..|||.|.||||| |||
BL03971___mur 692 ACCGGATCGAAGCCGGCACTTTCATGATTGCAGCTGCTTCCATGGGACAA 741
BSNT_05666___ 741 GGAAGTCATTATCGATAACGTCATTCCCACTCATCTAGAGTCGTTAACGG 790
|||||..|.||.|||||.||.|||||.||.|||.|.||.|||||||..|
BL03971___mur 742 -GAAGTGCTGATTGATAATGTAATTCCGACGCATTTGGAATCGTTAATCG 790
BSNT_05666___ 791 CAAAGCTGAGAGAAATGGGCTATCATATCGAAACAAGCGACGACCAGCTT 840
|.|||||..|.||||||||...||..||||||..||||..|||.|||.||
BL03971___mur 791 CCAAGCTCCGCGAAATGGGGGTTCGAATCGAAGAAAGCAGCGAGCAGATT 840
BSNT_05666___ 841 CTCATTGTCGGCGGGCAG-AAGAACTTAAAGCCGGTTGACGTCAAAACCC 889
.|.||.||||||||.||| ||||.||.||| |||||.||..|.|||||.|
BL03971___mur 841 TTAATGGTCGGCGGACAGAAAGAGCTGAAA-CCGGTCGATTTGAAAACGC 889
BSNT_05666___ 890 TCGTATACCCGGGGTTTCCGACTGATTTACAGCAGCCGATGACGGCGCTC 939
||||||||||.||.||||||||.|||.|.||||||||||||||..||||.
BL03971___mur 890 TCGTATACCCCGGCTTTCCGACCGATCTGCAGCAGCCGATGACATCGCTT 939
BSNT_05666___ 940 CTGACAAGGGCGAAAGGGACGAGTGTCGTCACAGACACCATCTACTCGGC 989
.|.||.|.|||.||.||||||||.||.|||||.||||||||.|||||.||
BL03971___mur 940 TTAACGAAGGCAAACGGGACGAGCGTTGTCACTGACACCATTTACTCCGC 989
BSNT_05666___ 990 AAGATTCAAGCACATTGATGAGCTGAGACGAATGGGCGCCAATATGAAAG 1039
..|.|||||.||.|||||.|||||||||||.|||||.||....|||||.|
BL03971___mur 990 TCGCTTCAAACATATTGACGAGCTGAGACGCATGGGTGCGTCGATGAAGG 1039
BSNT_05666___ 1040 TAGAAGGCAGATCTGCCATCATCACAGGTCCTG-TCGAGCTT--CAAGGC 1086
|.|||||.|||||.||.|||||.||.||.||.| || ||| ||.|||
BL03971___mur 1040 TTGAAGGAAGATCGGCGATCATTACCGGGCCAGCTC---CTTTGCAGGGC 1086
BSNT_05666___ 1087 GCAAAAGTGAAGGCGAGTGATCTGCGTGCCGGAGCCTGCTTGGTGGTAGC 1136
||.||.|||||.|||||||||||.||.||.|||||.||..|.||.||.||
BL03971___mur 1087 GCCAAGGTGAAAGCGAGTGATCTTCGGGCGGGAGCATGTCTCGTTGTTGC 1136
BSNT_05666___ 1137 CGGACTGATGGCTGATGGCGTCACGGAAATTACGGGACTGGAGCATATTG 1186
|||.||.|||||.||.||.|||||||||||.||.||..|||||||..|||
BL03971___mur 1137 CGGTCTAATGGCGGAAGGTGTCACGGAAATCACCGGTTTGGAGCACCTTG 1186
BSNT_05666___ 1187 ACCGCGGATACAG-CAGCCTTG-AGAAGAAGCTTGAGGG-----GCTTGG 1229
||.|.||.||||| ||| |||| |||| ||||| | |||.||
BL03971___mur 1187 ACAGAGGCTACAGTCAG-CTTGAAGAA-AAGCT-----GACAAAGCTCGG 1229
BSNT_05666___ 1230 AGCGACAATTTGGCGTGAAAGAATGACTGACGAAGAAATAGAACAGCTTC 1279
.||.||..|.|||||.||||.|.||||.|||.|.|||||.||||||||.|
BL03971___mur 1230 GGCCACTGTCTGGCGCGAAAAATTGACAGACCAGGAAATTGAACAGCTGC 1279
BSNT_05666___ 1280 AAAATTCATAA 1290
||||.||.|.|
BL03971___mur 1280 AAAACTCGTGA 1290
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