Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05614 and BL04005
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence dna-align/BSNT_05614___spoIID.1.5803.seq
# -bsequence dna-align/BL04005___spoIID.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05614___spoIID-BL04005___spoIID.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05614___spoIID-BL04005___spoIID.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05614___spoIID
# 2: BL04005___spoIID
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1075
# Identity: 752/1075 (70.0%)
# Similarity: 752/1075 (70.0%)
# Gaps: 101/1075 ( 9.4%)
# Score: 2517.5
#
#
#=======================================
BSNT_05614___ 1 ATGAAACAATTCGCAATCACACTATCCGTACTATGTGCA--TTGATTCTC 48
.|||||||..||..|||...||||.|.|.| ||.|||| .|||||.|.
BL04005___spo 1 TTGAAACAGCTCATAATTGTACTAGCAGGA--ATCTGCACGCTGATTTTA 48
BSNT_05614___ 49 TTGGTTCCCACACT-CTTGGTTATACCATTCCA--GCATAATAAGGAAGC 95
.|..|.||.||||| ||| ||..|.||.||.|| | ||.|.|
BL04005___spo 49 CTCATACCAACACTGCTT-GTCCTCCCTTTTCACGG--------GGGACC 89
BSNT_05614___ 96 GGGGGCCAGCGTAGAATCAGAAAAGACA-GCAGTCAGCACGAAACCAGCA 144
||||||.| |..||.||||.|| ||| || |||||| |.||.||
BL04005___spo 90 GGGGGCAA---TTAAAACAGAGAA-ACACGC--TCAGCA--ACACGAG-- 129
BSNT_05614___ 145 TCGAAAGGAGCAGAA----ACATTGAAAGCATCACCTGTTTCTATTCCCG 190
|||| |..|||| ||.||.||||..||.||.|||||.|||||.|
BL04005___spo 130 --GAAA--AAAAGAAAGTCACCTTAAAAGAGTCTCCCGTTTCAATTCCGG 175
BSNT_05614___ 191 TCTATCGA-------ACCGCAAATCAATCCGTAGAAAACATTCCGCTTGA 233
||||..|| ||||.||| ||.|||.|||||||||||||
BL04005___spo 176 TCTACAGAACGGCTGACCGGAAA-------GTTGAAGACATTCCGCTTGA 218
BSNT_05614___ 234 AGAGTATGTGATTGGAGTCGTCGCCTCCGAAATGCCGGCA-ACCTTTAAA 282
|||||||||.||.||.|||||.|||||.|||||||||||| |..||.|.|
BL04005___spo 219 AGAGTATGTCATCGGTGTCGTTGCCTCGGAAATGCCGGCAGATTTTGATA 268
BSNT_05614___ 283 CCTGAAGCACTGAAAGCCCAGGCGCTTGCCGCCAGAACATTTATTGTCAG 332
.| |||||..|.|||||.||.|||||.||.|||.|.||||..|||||.||
BL04005___spo 269 TC-GAAGCTTTAAAAGCACAAGCGCTGGCAGCCCGCACATACATTGTGAG 317
BSNT_05614___ 333 ACTGATGGTGTCAAATTCAGCGGTAGAAGCTCCTAAAGGCTCACTGGTGG 382
.|..|||||||||.|...|||.|||.|..|.||.||||||||.|||||.|
BL04005___spo 318 GCAAATGGTGTCAGAGCAAGCTGTACAGTCGCCGAAAGGCTCGCTGGTCG 367
BSNT_05614___ 383 ATGATACACAGATGTTCCAGGTGTATAAAAGCAAAGCGGAGCT--GAAAA 430
|||||||.||||||||||||||||||||||.|||||.|||||| |
BL04005___spo 368 ATGATACGCAGATGTTCCAGGTGTATAAAAACAAAGAGGAGCTCCG---- 413
BSNT_05614___ 431 AACAG--TGGGGCACAAG--CTATGAGACAAAACTGAAGAAAATCACAGA 476
||| ||.||.|.||| .||.||....|||.|.||.||..|.||.||
BL04005___spo 414 --CAGGCTGTGGAAGAAGGATTACGATTGGAAAATCAAAAAGGTGACCGA 461
BSNT_05614___ 477 TGCGGTAACCAGTACGCAAGGCAAAATCTTAACGTACAACAACCAGCCGA 526
.||.|||.|||||||||||||||||||.|||||.||..|..|..||||.|
BL04005___spo 462 AGCTGTAGCCAGTACGCAAGGCAAAATTTTAACCTATGAGCATAAGCCTA 511
BSNT_05614___ 527 TTGAAGCATCCTTTTTCTCCACAAGCAACGGCTACACAGAGAATGCAGAA 576
||||.||.||.||.|||||.||.||||||||.|||||.||||||||.|.|
BL04005___spo 512 TTGATGCTTCGTTCTTCTCGACGAGCAACGGGTACACCGAGAATGCCGGA 561
BSNT_05614___ 577 GCTTATTGGACAAGTGCTATCCCATATTTAAAAAGCGTCAAAAGCCCATG 626
||||||||||||||||.|||.||.||..|..|||||||.||||||.|.||
BL04005___spo 562 GCTTATTGGACAAGTGATATTCCGTACCTGCAAAGCGTGAAAAGCTCCTG 611
BSNT_05614___ 627 GGATAAAAAGTCTCCGAAAT---------ATAAGGCAACGAAAACCTTTA 667
|||.|.|||.||.||||||| || |||||.||||
BL04005___spo 612 GGACACAAAATCGCCGAAATTCCTGAACCAT---------AAAACGTTTA 652
BSNT_05614___ 668 CAGCGGCAGAATTTCAGCAAAAGCTTGGCGTCAAGCTGGATGGATCTAGC 717
|.|..||.||||||.|.||||||||.||.|||||||||...||.||.|.|
BL04005___spo 653 CTGTCGCTGAATTTGAACAAAAGCTCGGTGTCAAGCTGCCCGGTTCAAAC 702
BSNT_05614___ 718 -GCAGTAGGGAAGATTACCGGCGAG-ACACCGGGCCACCAGGTCGCAACT 765
||| |.||..||||.||| |..|| ||.|||||..|.|..||.||.|||
BL04005___spo 703 AGCA-TCGGAGAGATCACC-GAAAGAACGCCGGGAAAACGCGTAGCGACT 750
BSNT_05614___ 766 GCCGTCATTAACGGCAAGACGCTGAAAGGAAGAGACATACGTGAAAAGCT 815
||||||||.||.||.||||.|||..|.||||||||.||.||.||||||||
BL04005___spo 751 GCCGTCATCAATGGAAAGAAGCTTGAGGGAAGAGATATTCGCGAAAAGCT 800
BSNT_05614___ 816 GGGTCTCAACTCCGCCGATTTTGAATGGAAGCGAAATGGAGACACA-ATT 864
.||.|||||.||.||.||.|||||.|||||.||..|.|| ||..|| |||
BL04005___spo 801 CGGCCTCAAATCGGCAGACTTTGATTGGAAACGCGACGG-GAATCAGATT 849
BSNT_05614___ 865 ACAGTCACGACGAGAGGATTTGGCCACGGTGTGGGGATGAGCCAATACGG 914
|||||||||||.||.||||||||.||.||.|||||.||||||||||||||
BL04005___spo 850 ACAGTCACGACAAGGGGATTTGGACATGGAGTGGGAATGAGCCAATACGG 899
BSNT_05614___ 915 AGCGAATTTTATGGCCAAAGAAGGCAAAACGGTTGATGACATTGTAAAGT 964
.|||.|||.||||||.|||||.|||||.|..|..||.|||||.||.||||
BL04005___spo 900 TGCGCATTATATGGCGAAAGACGGCAAGAAAGCAGAAGACATCGTCAAGT 949
BSNT_05614___ 965 ACTATTACCAAGGCACA-------CAAATTTCTGAGGCAGATGCGTTTTT 1007
|.||||||.||||.||| |.||| |||||||..|||||
BL04005___spo 950 ATTATTACAAAGGAACAGCCGTATCCAAT-------GCAGATGAATTTTT 992
BSNT_05614___ 1008 GAATAAATATATGGCGAAAAAGTAG 1032
.||||||||.|||||||||||.||.
BL04005___spo 993 AAATAAATACATGGCGAAAAAATAA 1017
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