Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05603 and BL04009
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence dna-align/BSNT_05603___moaA.1.5803.seq
# -bsequence dna-align/BL04009___moaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05603___moaA-BL04009___moaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05603___moaA-BL04009___moaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05603___moaA
# 2: BL04009___moaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1068
# Identity: 749/1068 (70.1%)
# Similarity: 749/1068 (70.1%)
# Gaps: 84/1068 ( 7.9%)
# Score: 2487.5
#
#
#=======================================
BSNT_05603___ 1 ATGATTAC--AGAGTCGCGTCAGA-----TGTTGGATAAAAGAAACAGAC 43
.|||..|| |.||| || |.||||||.|.|.||.|.|.|
BL04009___moa 1 GTGAACACCAACAGT-------GAACAAGTTTTGGATCAGAAAAGCCGGC 43
BSNT_05603___ 44 CGCTGAGAGACCTTCGCATTTCTGTTACAGACCGCTGCAACTTCCGATGC 93
||||..|.||..|..|.||||||||.||.||||||||||||||..||||.
BL04009___moa 44 CGCTTCGGGATTTAAGAATTTCTGTCACCGACCGCTGCAACTTAAGATGT 93
BSNT_05603___ 94 ACGTACTGTATGCCCGCCGAATTATTCGGCCCGGATTATCCTTTTTTAAA 143
|||||.||.|||||.||.|||.|.||.||.|.|||||||||.|||||...
BL04009___moa 94 ACGTATTGCATGCCTGCAGAAATCTTTGGGCAGGATTATCCGTTTTTGCC 143
BSNT_05603___ 144 GAAAGAGGAGCTGCTTTCATTTGAGGAGCTGGAACGGCTTGCGACATTGT 193
.||||..||.|||.|.||.|||||.|||||.|||||..|.||.|...|||
BL04009___moa 144 AAAAGGCGAACTGTTGTCCTTTGAAGAGCTTGAACGATTGGCCAAGCTGT 193
BSNT_05603___ 194 TTG-TCACAAGATTTGGCGTTGAAAAAATCCGCCTGACCGGCGGAGAGCC 242
||| |||..|| ||.||.||.|||||||||||.||.||||||||||||||
BL04009___moa 194 TTGTTCATCAG-TTCGGGGTAGAAAAAATCCGTCTCACCGGCGGAGAGCC 242
BSNT_05603___ 243 CCTCATGAGAAAGGATATGCCGGAGTTAATCAAAAAACTGGCCCGCAT-A 291
.||.||||||||.|||||||||||.|||.||...||.||.||..|.|| |
BL04009___moa 243 GCTGATGAGAAAAGATATGCCGGAATTAGTCGGGAAGCTTGCAGGGATCA 292
BSNT_05603___ 292 CCGGGTATTCGTGACATCGCGATGACGACAAACGGATCAC----TGCTGC 337
..||| |||||.||.||.||||||||.||.||||| | ||||||
BL04009___moa 293 AAGGG-ATTCGCGATATTGCGATGACAACGAACGG----CGTTTTGCTGC 337
BSNT_05603___ 338 CTGTTTATGCAAAGAGGCTCAAGGAGGCTGGGCTGAAAAGGGTTACGATA 387
|.|||||.||..|.|.|||.||..|.||.|||||||||.|.||.|||.|.
BL04009___moa 338 CGGTTTACGCTGACAAGCTGAAAAAAGCGGGGCTGAAACGTGTAACGGTC 387
BSNT_05603___ 388 AGCCTTGATTCTTTAGAAGACGAGCGTTTTAAGAAGATAAACGGGCGCGG 437
|||||.|||||..|.||.||.||||||||.||...|||.|||||..|.||
BL04009___moa 388 AGCCTGGATTCCCTGGATGATGAGCGTTTCAAATCGATCAACGGAAGAGG 437
BSNT_05603___ 438 TGTTTCTGTCAGCAAGGTGCTGGAAGGCATTGAAGCGGCGAAGCAAGCAG 487
.|||||.||||||||||||||||..||.||||||||||||||..|.||.|
BL04009___moa 438 CGTTTCCGTCAGCAAGGTGCTGGCCGGAATTGAAGCGGCGAAAAAGGCCG 487
BSNT_05603___ 488 GGCTCGGTGTTAAAATCAATATGGTCGTTCA-AAAGGGCGTCAATGAAAA 536
|.|||||.||.||.|||||.||||||||.|| |||||| ||||||||.||
BL04009___moa 488 GACTCGGCGTCAAGATCAACATGGTCGTCCAGAAAGGG-GTCAATGAGAA 536
BSNT_05603___ 537 AGATATACTGCCTATGGCCCGTTATTTTAAAGAAAAAGGGCATATCCTGA 586
.|||||..||||.||||||||.|||||.|||||||||||.|||||..||.
BL04009___moa 537 GGATATTTTGCCGATGGCCCGCTATTTCAAAGAAAAAGGCCATATTTTGC 586
BSNT_05603___ 587 GATTCATTGAATTTATGGACGTAGGCAACACCAACCAATGGGAAAAGAAA 636
|.||.|||||.||||||||.||.||.|||||.||..||||| |
BL04009___moa 587 GGTTTATTGAGTTTATGGATGTCGGGAACACAAATGAATGG--------A 628
BSNT_05603___ 637 GACGTCA--------TGACAAAGGCGGAAATCAT--AGATTTGATCAATG 676
..||||| ||.|.||.|||||.||||| .|| |.|||||||
BL04009___moa 629 ACCGTCAGTCAGTGGTGGCCAAAGCGGATATCATCCGGA--TCATCAATG 676
BSNT_05603___ 677 AACACATGCCGGTTGAGCCGATAGCGCCTAATTATATAGGCGAAGTGGCT 726
||.|.||||||.||||.|||||.|..||.||.||...|||.|||||.|
BL04009___moa 677 AAGATATGCCGATTGAACCGATCGACCCGAACTACGAAGGAGAAGTCG-- 724
BSNT_05603___ 727 TCCA----GATTCCGCTACTTGGACGGCTCCGGAGAAATCGGCGTCATAT 772
|| |||.|||.|||.||||||||||.|||||||||||..|.||.|
BL04009___moa 725 --CAAAACGATACCGATACCTGGACGGCTCAGGAGAAATCGGTTTTATCT 772
BSNT_05603___ 773 CATCTGTATCTGATGCGTTCTGCGGATCTTGCAACAGAGCCCGTCTTTCT 822
|.||||||||.|||||.||.|||....|.|||||||||||..|.||.||.
BL04009___moa 773 CTTCTGTATCCGATGCTTTTTGCACCACATGCAACAGAGCAAGACTATCG 822
BSNT_05603___ 823 GCGAGAGGAGAGCTGTTTACCTG-CTTATTCGCTTCAAGCGGATTTGACC 871
||||.|||.|||||.||.||.|| ||| |||||.||||||||.|||||..
BL04009___moa 823 GCGAAAGGCGAGCTTTTCACATGTCTT-TTCGCATCAAGCGGGTTTGATT 871
BSNT_05603___ 872 TCAGAGCTCCGGTTC-------GCCAGGAATTAAGTGATGACGAACTATC 914
|.|||.| |..|.|| |.||| |..|||.|.||.||..|
BL04009___moa 872 TAAGAAC-CTTGATCAGAAGCGGGCAG------ACCGATCAGGAGCTGGC 914
BSNT_05603___ 915 AGAAATGATCGGGATAGTATGGAAAAATCG-GATCGATCAGTATTCAGTC 963
.||...||||||.|..||.|||...||||| ||| ||.||.|||||..||
BL04009___moa 915 GGAGGCGATCGGCACCGTCTGGCGGAATCGCGAT-GACCAATATTCTCTC 963
BSNT_05603___ 964 GATCGTACGCTAT--CAAAAGC--ATCTG-GCAAAAAGAAAGTGGAAATG 1008
||.|| ||||.| ||||||| .||.| |.|||||| ||.||||||
BL04009___moa 964 GACCG--CGCTCTTGCAAAAGCGGTTCCGCGGAAAAAG---GTTGAAATG 1008
BSNT_05603___ 1009 TCTTATATTGGCGGTTAA 1026
||.||||||||.||.|||
BL04009___moa 1009 TCCTATATTGGAGGATAA 1026
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