Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04708 and BL04021
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:56
# Commandline: needle
# -asequence dna-align/BSNT_04708___dhbC.1.5803.seq
# -bsequence dna-align/BL04021___dhbC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04708___dhbC-BL04021___dhbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04708___dhbC-BL04021___dhbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04708___dhbC
# 2: BL04021___dhbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1314
# Identity: 797/1314 (60.7%)
# Similarity: 797/1314 (60.7%)
# Gaps: 240/1314 (18.3%)
# Score: 2255.5
#
#
#=======================================
BSNT_04708___ 1 ATGTTGGATCAAAACGTTATAACAGAAACAAAAGCG------GAGCATTT 44
|||.| |.|||||.||..| |...||.||||| ||.||..|
BL04021___dhb 1 ATGAT-----AGAACGTCATGTC-GTGTCAGAAGCGCTTGCAGATCAGCT 44
BSNT_04708___ 45 GCTTCATGAATATCAGCCGGGCGC------CTTTTTCTTAGCGTCTCCTC 88
|.|..|.|||||||||.|.||.|| |||||||| |.||.|||.
BL04021___dhb 45 GTTAAAGGAATATCAGGCCGGTGCTTCATTCTTTTTCT---CTTCCCCTG 91
BSNT_04708___ 89 ATCGTG----TACTGTTAGCGAAAGGTATATGTGAAATCGTACCGGAGGC 134
|.|| | |.||| |||.|||||.|.|.|| |.|
BL04021___dhb 92 AGCG-GACCATTCTG---GCGGAAGGTGTTTTTG----CTT--------- 124
BSNT_04708___ 135 AGACGG----GCAAAACCAAATGGAAACCCTTTCTGGCCGAATTGCAGAG 180
|.| .||||.|.||..|.|||.||||.|| |||
BL04021___dhb 125 ---CTGTTTCTCAAACCGAAGAGCAAAGCCTTGCT----------CAG-- 159
BSNT_04708___ 181 ACG--CTGCG-----TCAGGCAAAACAATCAGGGCAAA---GCCGG---- 216
|| ||||| ||.| ||||.|..|||||..|| ||.||
BL04021___dhb 160 -CGGACTGCGGAAGTTCTG--AAAAAAGCCAGGGAGAACGGGCAGGAAAA 206
BSNT_04708___ 217 -CCGCTTGTTGTCGGGGCCGTTCCTTTTGATCAAGTAAAAGCAGCGCGGC 265
|||.||||.||.||.||.||.||.|||||..|.|.|| ||| ||||
BL04021___dhb 207 TCCGATTGTAGTTGGAGCTGTGCCATTTGACGATGCAA----AGC-CGGC 251
BSNT_04708___ 266 TC-GTT----GTACCTGAAGAAG-------TGCGCTGGTCAGGACCGCTT 303
.| ||| ||.||.|..|||| |||| ||.||||
BL04021___dhb 252 GCAGTTAACCGTGCCGGTCGAAGCGTGGCATGCG-------GGGCCGC-- 292
BSNT_04708___ 304 CAATTTGATCATGAGGAAAAGGAACAGCAGGCTGGGCATACATACCAC-A 352
||| ||||.|.|.||| || |
BL04021___dhb 293 -----TGA-CATGTGAAGAAG-------------------------ACGA 311
BSNT_04708___ 353 TAAAGCCTGTTCCTGAACCTG---------------------AG--GATT 379
||||| ..||.|||||||||| || ||||
BL04021___dhb 312 TAAAG-AGGTGCCTGAACCTGCCCTGCACCCCTATGATGTCCAGCAGATT 360
BSNT_04708___ 380 ATAA------------AAAT----GGTGTTGAACAAGGGCTGACACGCAT 413
..|| |.|| ||.||...||||||..||.||.|.||
BL04021___dhb 361 CCAAGCCCGGAAGCGTATATGGCCGGAGTCAGACAAGGATTGGCAGGTAT 410
BSNT_04708___ 414 TGCCGATGGAACACTCAGCAAAATCGTCCTGTCCAGATCGCTGCATTTGA 463
.||.|..|||..|..||||||.||||||||.|||.|.||..||||..|||
BL04021___dhb 411 AGCAGCAGGAGAATACAGCAAGATCGTCCTTTCCCGGTCATTGCAGCTGA 460
BSNT_04708___ 464 CATCGCCTGAAC-----CGAT-TCAGACGGATGAATTGCTTCGCCATCTG 507
|.||||| ||.| |||| || |.|.|||||||.||..||||.
BL04021___dhb 461 CCTCGCC-GATCAAAGTCGATATC-----GGTCAATTGCTGCGAAATCTT 504
BSNT_04708___ 508 G--CTCAGCATAACTCGCATGGCTACACGTTTGCCGCAGA------CGTG 549
| |.|.|||..||..|| ||.||||..|||||||..|| ||.|
BL04021___dhb 505 GCCCGCCGCAATACAAGC--GGGTACAACTTTGCCGTTGATTTAACCGGG 552
BSNT_04708___ 550 TCCAGTCA---GGAGGAAACGTCTCCCCGCCGAACATTGCTCGGAGCAAG 596
|||||| |.|| |.||.|||...||.|||.|.||.||.||
BL04021___dhb 553 --CAGTCATCTGAAG-------CGCCTCGCACCACTTTGATAGGCGCGAG 593
BSNT_04708___ 597 TCCGGAGCTCCTCGTTTCAAGGATGGGAACACAGGT----CGTT---TCC 639
|||.||.||.||.||.|||.|| ..|.||| |||| .|.
BL04021___dhb 594 TCCCGAACTGCTTGTATCACGG-------TCCGGGTTCTGCGTTACGGCA 636
BSNT_04708___ 640 AACCCATTAGCCGGCTCAAGACCGCGCAGTAATGATCCTGTTGAAGACCA 689
||.||.|||||.||.||||||||.||.||..|||||||.|..|||||.|.
BL04021___dhb 637 AATCCTTTAGCAGGTTCAAGACCTCGGAGCGATGATCCCGAAGAAGATCG 686
BSNT_04708___ 690 GCGCCGGGCAGCTGAATTGCTTTCTTCCGCAAAGGATCTTCATGAGCACG 739
..|.|||||.||||||.|||||.||||..|.||.||.|.|||.||.||.|
BL04021___dhb 687 AAGACGGGCGGCTGAACTGCTTGCTTCGCCTAAAGACCGTCACGAACATG 736
BSNT_04708___ 740 CGGTTGTCGCTGACGCGGTTGCGGCAGCGCTGAGACCTTTCTGCCGGACG 789
||||.||.|..||.||||||||..|.|||||.||.||.||.|||||||.|
BL04021___dhb 737 CGGTCGTTGTCGAAGCGGTTGCTTCCGCGCTCAGGCCGTTTTGCCGGAAG 786
BSNT_04708___ 790 CTGGAGGTTCCGGAGAAGCCTTCACTGATCAAAACGGAAACGATGTGGCA 839
||||||||.|||| |.||.||.||.||||..|||...|||||||||||
BL04021___dhb 787 CTGGAGGTGCCGG---AACCGTCGCTCATCAGCACGCCGACGATGTGGCA 833
BSNT_04708___ 840 CCTGTCCAGCGTGATT-AAGGGAGAGCTTTCCGATCCGTCTGTAACCGCA 888
.|| |.||.||..||| ||||||||||||.|.||.|..||||||.|..||
BL04021___dhb 834 TCT-TTCAACGGAATTGAAGGGAGAGCTTACAGACCTCTCTGTATCATCA 882
BSNT_04708___ 889 CTTGAATTAGCGGCGGCGCTCCACCCGACGCCAGCCGTCTGCGGAACACC 938
.|.||..|.||.||.||.||.||.||||||||.||.||||||||.||.||
BL04021___dhb 883 TTGGAGCTTGCCGCCGCCCTTCATCCGACGCCCGCTGTCTGCGGCACGCC 932
BSNT_04708___ 939 GACTGATCTTGCAAGAGAAGCGATT-CTCAGCATTGAACCATTTGACCGC 987
|||..||...||.|.|||||||||| ..||| |||||.||.|||||||||
BL04021___dhb 933 GACGAATGCGGCGAAAGAAGCGATTAAACAG-ATTGAGCCGTTTGACCGC 981
BSNT_04708___ 988 GGTTTCTTTACCGGCATGGTCGGATGGTGTGACGATGCCGGTGACGGAGA 1037
||.||.||.||.||.||||||||.|||||.||||..|.||||||||||||
BL04021___dhb 982 GGGTTTTTCACAGGTATGGTCGGCTGGTGCGACGCGGACGGTGACGGAGA 1031
BSNT_04708___ 1038 ATGGATCGTGACCATCCGTTGTGCAGAAGCAGAAGAACGCTCTCTCCGCC 1087
||||.|.||.||.||.||.|||||.||.||.||.||||.|.|.||.||.|
BL04021___dhb 1032 ATGGGTTGTAACGATTCGCTGTGCCGAGGCGGAGGAACACGCGCTTCGAC 1081
BSNT_04708___ 1088 TGTATGCTGGAGCTGGTGTTGTGGCCGGTTCAAAGCCCGAGGACGAGCTT 1137
||||.||.||.||.||..||||.|||||.||.|||||.||.|||||.|||
BL04021___dhb 1082 TGTACGCAGGTGCCGGAATTGTCGCCGGGTCGAAGCCTGAAGACGAACTT 1131
BSNT_04708___ 1138 CAGGAGACGTCCGCAAAGTTTCGGACAATGCTGCGGGCAATGGGCGTGGA 1187
...||.|||||.||||||||||||||||||||.|..||.|||||..||
BL04021___dhb 1132 GCCGAAACGTCTGCAAAGTTTCGGACAATGCTTCTTGCGATGGGAATG-- 1179
BSNT_04708___ 1188 TCACATATGA---- 1197
.||| .|||
BL04021___dhb 1180 -AACA-GTGAGTAA 1191
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