Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04706 and BL04023
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:55
# Commandline: needle
# -asequence dna-align/BSNT_04706___dhbB.1.5803.seq
# -bsequence dna-align/BL04023___dhbB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04706___dhbB-BL04023___dhbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04706___dhbB-BL04023___dhbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04706___dhbB
# 2: BL04023___dhbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 997
# Identity: 627/997 (62.9%)
# Similarity: 627/997 (62.9%)
# Gaps: 128/997 (12.8%)
# Score: 1751.5
#
#
#=======================================
BSNT_04706___ 1 ATGGCTATACCTGCCAT-TCAGCCGTATCAAATGCC-GACAGCGTCTGAT 48
|||||.||.|||||||| |.| |||||.|||||||| || |||.||..||
BL04023___dhb 1 ATGGCCATTCCTGCCATCTTA-CCGTACCAAATGCCAGA-AGCATCAAAT 48
BSNT_04706___ 49 ATGCCGCAAAACAAAGTATCATGGGTGCCTGATCCAAATCGGGCTG-TCT 97
||||||.|||||||.||.||||||...|||.||||.||.||.||.| .||
BL04023___dhb 49 ATGCCGAAAAACAAGGTGTCATGGACTCCTCATCCGAAGCGTGCGGCGCT 98
BSNT_04706___ 98 TGTTAATACACGATATGCAAAACTATTTTGTCGATGCTTTCACAGCG--- 144
| .|.||.|||||||||||..|.||||||.||.|.|||| |.||
BL04023___dhb 99 T-CTGATCCACGATATGCAGCAATATTTTCTCAACGCTT----ACCGTTA 143
BSNT_04706___ 145 -GGAGCGTCTCCGGTAATAGAGCTTTCAGCGAATATACGA-AAGCTGAAG 192
||.|.|||||||||.|.|||.||....||.||||| |.| |||||...|
BL04023___dhb 144 CGGCGAGTCTCCGGTCACAGATCTGCTGGCTAATAT-CAAGAAGCTTCGG 192
BSNT_04706___ 193 AATCAATGTGTTCAGCTTGGGATTCCTGTTGTCTATACCGCACAGCCGGG 242
||.|.|||||...||||.||.||.||.|||.|.|..||.||.||.||.||
BL04023___dhb 193 AAGCGATGTGCCGAGCTCGGCATGCCGGTTATTTTCACGGCTCAACCCGG 242
BSNT_04706___ 243 AAGCCAAAATCCGGATGACCGTGCGCTGCTGACAGACTTTTGGGG-CCCG 291
...|||.|..|||||.||.||.|.|||.||...|||||||||||| ||||
BL04023___dhb 243 CGCCCAGACACCGGAAGAACGGGGGCTTCTCCAAGACTTTTGGGGACCCG 292
BSNT_04706___ 292 GGATTAAACAGCGGTCCT------TATGAGGAGAAAAT----TATAACCG 331
|.|| ||||||| .|||||.||||.|| .|| |
BL04023___dhb 293 GAAT-------CGGTCCTGATCCCGATGAGCAGAAGATCGTGGAT----G 331
BSNT_04706___ 332 AGCTGGCACCAGAGGATGATGATCTTGTGCTGACAAAATGGAGATACAGC 381
|||||..|||..|.||.|..||..||||..||||.||.|||||.||||..
BL04023___dhb 332 AGCTGAAACCGAATGAAGGCGACATTGTTTTGACCAAGTGGAGGTACAAT 381
BSNT_04706___ 382 GCGTTTAAGAGAACGAATC---------TGCTTGAAATGATGCGCAAAGA 422
||.||.|..|.|||.||.| |||| .||.|.|| |
BL04023___dhb 382 GCCTTCAGAAAAACCAACCTTTTAGGCGTGCT-----GGAGGAGC----A 422
BSNT_04706___ 423 GGGACGCGATCAGCTGATCATTACAGGAATTTACGCCCATATCGGCTGTC 472
|||.||.||||||||.||.||.||.|||||.||.||||||||||||||.|
BL04023___dhb 423 GGGGCGGGATCAGCTCATAATCACCGGAATCTATGCCCATATCGGCTGCC 472
BSNT_04706___ 473 TTGTTACAGCATGTGAAGCATTTATGGAGGATATTAAAGCCTTTTTGGTG 522
|..|.||.||||||||.||.||||||.|.||||||.||.|.|||||.||.
BL04023___dhb 473 TGATGACGGCATGTGATGCTTTTATGCAAGATATTGAAACATTTTTCGTC 522
BSNT_04706___ 523 GGAGATGCAGTTGCTGATTTTTCATTAGAAAAACATCAAATGGCGCTGGA 572
||||||||.||.||.|||||.||||||.|..|.|||.||||||| |...|
BL04023___dhb 523 GGAGATGCGGTGGCGGATTTCTCATTAAAGCATCATGAAATGGC-CATCA 571
BSNT_04706___ 573 C-TATGCGGCTGGACGCTGTGCGTTTACCGTG-----ATGACTG----AC 612
| ||.||.||||..|| ||.|.||| ||.|||| ||
BL04023___dhb 572 CATACGCAGCTGACCG--------TTGCAGTGTCACAATTACTGCGGAAC 613
BSNT_04706___ 613 AGTCTTCT--------TGATCAGCTGCAGAATGCGCCGGCAGACGTTCAA 654
|| ||||| ||| .||.||..|||.|| |..|.|.||| |||
BL04023___dhb 614 AG-CTTCTGAGCCGACTGA-AAGATGGCGAAAGC-CATGAACACG--CAA 658
BSNT_04706___ 655 A--AAACGTCAGCAAACACTGGCAAAAAGAATGTGTTTACATGTGAGAAT 702
| |||..|| .||..|||||.||||| .|||.|
BL04023___dhb 659 AAGAAAGCTC-TCATGCACTGACAAAA-----------------CAGATT 690
BSNT_04706___ 703 ATCCGTAAACAAATTGCTGAGCTTCTACAAAAAACACCGGAAGACATCAC 752
||.||..||||..|.||...||||||.|...||.|.||||||.|.||.|.
BL04023___dhb 691 ATTCGCGAACAGGTGGCATCGCTTCTTCTTGAATCGCCGGAAAAGATAAG 740
BSNT_04706___ 753 AGATCA-AGAGGATTTGCTCGATCGTGGTCTTGATTCGGTAAGGATCATG 801
.|| || .||..|||||.||.|.||.||..|||||||.||.||.||||||
BL04023___dhb 741 CGA-CAGCGAAAATTTGATCTACCGGGGAATTGATTCCGTGAGAATCATG 789
BSNT_04706___ 802 ACATTGGTGGAACAATGGCGCCGTGAAGGGGC-AGAGGTGACTTTCGTGG 850
|...|.|..||.|..||||||||.| .||||| .||||||.|.||.||.|
BL04023___dhb 790 AGTCTCGCAGAGCGCTGGCGCCGAG-CGGGGCGGGAGGTGTCGTTTGTAG 838
BSNT_04706___ 851 AATTGGCTGAACGCCCAACGATCGAAGAATGGCAGAAATTG--------C 892
|..|.||.||...|||..||||.|||.|.|||..||.|.|| |
BL04023___dhb 839 AGCTTGCGGAGGACCCTTCGATTGAAAACTGGTGGAGACTGTTGTCCTCC 888
BSNT_04706___ 893 TCACAACCCGCAGCCAGCAAGTGCTGCCAAACGCGGATTATTTATAA 939
||..||...|||.| ..|||||||.||.||.|||..||.|
BL04023___dhb 889 TCTAAAGAAGCACC--------TTTGCCAAATGCAGACTATCAATGA 927
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