Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04700 and BL04025

See Amino acid alignment / Visit BSNT_04700 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:52
# Commandline: needle
#    -asequence dna-align/BSNT_04700.1.5803.seq
#    -bsequence dna-align/BL04025.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04700-BL04025.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04700-BL04025.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04700
# 2: BL04025
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     148/244 (60.7%)
# Similarity:   148/244 (60.7%)
# Gaps:          53/244 (21.7%)
# Score: 431.0
# 
#
#=======================================

BSNT_04700         1 ATGGCAAATCCTTTTGAAAATGCGGATGGCACATATTTGGTGCTGGTCAA     50
                     |||.||||||||||||||||||...|.|||||||||.|.||    .|.||
BL04025            1 ATGACAAATCCTTTTGAAAATGAACACGGCACATATGTCGT----TTTAA     46

BSNT_04700        51 TGAA----GAAGGCCAATATTCCCTATGGCCGGGTTTTATAGATGTGCCG     96
                     ||||    ||.|||||.|||||.||.|||||||..||.||..||.|.|||
BL04025           47 TGAATCAGGATGGCCAGTATTCACTCTGGCCGGCCTTCATTCATATTCCG     96

BSNT_04700        97 AGC-GGCTGGACAGTCGT-TCATGAGCAAAAAGGGCGTGAA---------    135
                      || ||.|||...||||| |     ||     |||   |||         
BL04025           97 -GCAGGGTGGGAGGTCGTCT-----GC-----GGG---GAAGCGAGCCGC    132

BSNT_04700       136 ---GCTTGTTTGGACTATATCCAATCGCATTGGAGCGATATGAGGCCAAA    182
                        ||.|||.|.|||||||||...|||.||||||.||||.|...|||.||
BL04025          133 AGCGCCTGTATCGACTATATCAGCTCGAATTGGACCGATCTCTCGCCGAA    182

BSNT_04700       183 CAGCCTAAAGGCT-GTTGAAAATGT--------GTAA-------    210
                     ||||.|.|| ||| ||||.|.|.||        ||.|       
BL04025          183 CAGCATCAA-GCTGGTTGCAGAAGTACACGGCGGTCAGCAATGA    225


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