Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00366 and BL05014
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence dna-align/BSNT_00366___ybxG.1.5803.seq
# -bsequence dna-align/BL05014___ybxG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00366___ybxG-BL05014___ybxG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00366___ybxG-BL05014___ybxG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00366___ybxG
# 2: BL05014___ybxG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1399
# Identity: 1111/1399 (79.4%)
# Similarity: 1111/1399 (79.4%)
# Gaps: 38/1399 ( 2.7%)
# Score: 4490.5
#
#
#=======================================
BSNT_00366___ 1 GTGGCAAATAAAGAATTAAAGAGGGGCCTGGGCGCGCGCCATATTCAGAT 50
|||||.||.||||||||.|||||.|||||||||||||||||.||.||.||
BL05014___ybx 1 GTGGCGAACAAAGAATTGAAGAGAGGCCTGGGCGCGCGCCACATCCAAAT 50
BSNT_00366___ 51 GATCGC-CTTGGGCGGTACAATCGGTGTTGGCTTGTTTATGGGTTCTGCC 99
|||.|| ||| |||||.||.|||||.||.||.||.||||||||.|||.||
BL05014___ybx 51 GATTGCGCTT-GGCGGCACTATCGGCGTCGGTTTATTTATGGGATCTTCC 99
BSNT_00366___ 100 AGCACGATTTCATGGACTGGCCCATCTGTCCTTCTGGCTTATGCAATATG 149
||||||||....|||||.||.||.||.|||||.||.||||||||.||.||
BL05014___ybx 100 AGCACGATAAAGTGGACAGGACCTTCCGTCCTGCTTGCTTATGCCATTTG 149
BSNT_00366___ 150 CGGAATTTTTATCTTTTTTATTATGCGTGCGATGGGTGAAATGCTGTATG 199
||||||||||||||||||||||||||||||.|||||.||||||||.||||
BL05014___ybx 150 CGGAATTTTTATCTTTTTTATTATGCGTGCAATGGGGGAAATGCTATATG 199
BSNT_00366___ 200 TCGAGCCGAGCACAGGTTCTTTTGCGACGTTCGGCCATCAATATATTCAT 249
|.|||||.|||||.|||||.||||||||.|||||||||||||||||.||.
BL05014___ybx 200 TAGAGCCAAGCACCGGTTCATTTGCGACATTCGGCCATCAATATATACAC 249
BSNT_00366___ 250 CCGATGGCAGGTTATATAACAGCATGGAGCAACTGGTTCCAGTGGATTAT 299
|||.||||.||.|||||.||.||.||||||||||||||.||||||.|.||
BL05014___ybx 250 CCGTTGGCCGGATATATGACCGCGTGGAGCAACTGGTTTCAGTGGGTGAT 299
BSNT_00366___ 300 CGTCGGCATGTCAGAAATTATCGCTGTCGGTTCTTATATGAAGTATTGGT 349
.|||||.|||||.||.||.|||||.|||||....||.||||||||.||||
BL05014___ybx 300 TGTCGGGATGTCCGAGATCATCGCCGTCGGGGAGTACATGAAGTACTGGT 349
BSNT_00366___ 350 TCCCGGATTTGCCTGCTTGGATACCTGGTATCGTGGCAATGGTGATTCTT 399
|.||||||.|.||.|||||||||||.||.||..|.|||||||.||||||.
BL05014___ybx 350 TTCCGGATCTTCCCGCTTGGATACCGGGCATTATCGCAATGGCGATTCTC 399
BSNT_00366___ 400 GGTGCGGCGAATTTAATTTCTGTTAAGTCGTTTGGCGAATTTGAGTTTTG 449
||.|..||.||..|..|.||||||||.||.|||||.||.|||||.|||||
BL05014___ybx 400 GGAGGAGCAAACCTTGTCTCTGTTAAATCATTTGGTGAGTTTGAATTTTG 449
BSNT_00366___ 450 GTTTGCGATGATTAAAATCGTGACGATTATCTTGATGATTATTGCGGGAA 499
|||||||||||||||||||||.||||||.|.||.||||||...|||||..
BL05014___ybx 450 GTTTGCGATGATTAAAATCGTTACGATTGTATTAATGATTGCAGCGGGGT 499
BSNT_00366___ 500 TCGGAATTATTTTCTTCGGTTTTGGCAATGGCGGAGATGCGATCGGTTTG 549
||||.||||||||||||||.||.|||||.||||||.|.||||||||.||.
BL05014___ybx 500 TCGGGATTATTTTCTTCGGATTCGGCAACGGCGGACAAGCGATCGGGTTT 549
BSNT_00366___ 550 TCGAACCTGTGGTCACACGGGGGCTTCTTTGCAGGAGGTTTCTCAGGTTT 599
||.|||||.|||||.|||||.||.||||||.||||.||.||||||||.||
BL05014___ybx 550 TCAAACCTTTGGTCGCACGGCGGTTTCTTTACAGGCGGATTCTCAGGATT 599
BSNT_00366___ 600 CTTCTTTGCACTGTCTCTTGTCATTGCAGCCTATCAAGGAGTTGAGCTGA 649
|||||||||.|||||.||.|||||.||.||.||||||||.||.||.||||
BL05014___ybx 600 CTTCTTTGCGCTGTCGCTGGTCATCGCCGCTTATCAAGGGGTCGAACTGA 649
BSNT_00366___ 650 TCGGGATTACAGCGGGTGAAGCGAAGGACCCGCAAAACACGCTAAGAAAT 699
|.||.|||||.|||||.||.||.||.||.||||||||||||||.|||.|.
BL05014___ybx 650 TAGGAATTACGGCGGGGGAGGCAAAAGATCCGCAAAACACGCTGAGACAC 699
BSNT_00366___ 700 GCGATTCAAAGTATTATCTGGCGTATTTTGATTTTCTACATTGGCGCTAT 749
|||||.|||||||||||.|||||||||||.||||||||.||||||||.||
BL05014___ybx 700 GCGATCCAAAGTATTATTTGGCGTATTTTAATTTTCTATATTGGCGCCAT 749
BSNT_00366___ 750 TTTTGTGATCGTGACGGTGTATCCTTGGGATGAGCTCAACTCACTCGGAA 799
.||.|||||.||.||.||.|||||||||||||||||.||..||.||||.|
BL05014___ybx 750 CTTCGTGATTGTCACAGTCTATCCTTGGGATGAGCTGAATGCAATCGGTA 799
BSNT_00366___ 800 GTCCGTTTGTGTCTACGTTCTCGAAAATCGGAATTACGGCAGCGGCCGGC 849
||||||||||.||.||.||..|||||.|||||||||||||.||.||||||
BL05014___ybx 800 GTCCGTTTGTATCCACTTTTGCGAAAGTCGGAATTACGGCGGCAGCCGGC 849
BSNT_00366___ 850 ATTATTAACTTTGTCGTAATTACTGCGGCAATGTCCGGCTGTAATAGCGG 899
|||||||||||.|||||.||.||.|||||||||||||||||.||.|||||
BL05014___ybx 850 ATTATTAACTTCGTCGTCATGACGGCGGCAATGTCCGGCTGCAACAGCGG 899
BSNT_00366___ 900 TATTTTCAGCGCGGGCCGCATGCTGTATACACTGGGTGTCAATGGACAAG 949
.||||||||.||||||||||||||.||||||.||||.||.||.||.||||
BL05014___ybx 900 AATTTTCAGTGCGGGCCGCATGCTTTATACATTGGGAGTAAACGGCCAAG 949
BSNT_00366___ 950 CACCGAAATTCTTTAAGAAGATTTCACGCAATGGTGTGCCGCTGTATGGC 999
|.||.||||||||||.|||||||||..|.|||||.||||||.|.||.||.
BL05014___ybx 950 CGCCAAAATTCTTTACGAAGATTTCCAGAAATGGCGTGCCGTTATACGGG 999
BSNT_00366___ 1000 ACAATTGCGGTGCTGATCGGTTTGGCTGTCGGCGTTGTACTGAACTATAT 1049
||.|||||.||..|||||||||||||..|||||||.||..|.||.|||||
BL05014___ybx 1000 ACGATTGCCGTCTTGATCGGTTTGGCAATCGGCGTCGTTTTAAATTATAT 1049
BSNT_00366___ 1050 CGCGCCGCCGAAGATCTTTGTCTATGTATACAGCGCAAGCGTGCTCCCAG 1099
.||||||||.||.||.|||||.|||||||||||.||.|||||||||||.|
BL05014___ybx 1050 TGCGCCGCCTAATATTTTTGTGTATGTATACAGTGCGAGCGTGCTCCCGG 1099
BSNT_00366___ 1100 GGATGATTCCCTGGTTTATCATTTTGATCAGTCATATCGGATTCAGAAAA 1149
||||||||||.||||||.|||||.||.||||.||||||||||||||||||
BL05014___ybx 1100 GGATGATTCCGTGGTTTGTCATTCTGCTCAGCCATATCGGATTCAGAAAA 1149
BSNT_00366___ 1150 GCGAAGGGTGCTGCATTAGATAAACATCCATTCAAAATGCCGTTTGCTCC 1199
||.||.||.||||.|.|.||.||||||||.|||||||||||.||.||.||
BL05014___ybx 1150 GCAAAAGGAGCTGAAATTGACAAACATCCGTTCAAAATGCCTTTCGCCCC 1199
BSNT_00366___ 1200 TTTTACAAACTATTTCACGATTGCTTTCTTGCTGATGGTTCTGGTTGGCA 1249
..|.||.||||||||.|||||||.||||.|.||.|||||..||||.||||
BL05014___ybx 1200 AGTGACGAACTATTTGACGATTGGTTTCCTTCTTATGGTATTGGTGGGCA 1249
BSNT_00366___ 1250 TGTGGTTTAACGATGATACTCGTATCTCCCTGATTGTAGGCGTGATTTTC 1299
|||||||.|||.||||.||.||..|.||.||||||||.||.||.||||||
BL05014___ybx 1250 TGTGGTTCAACAATGACACACGCGTGTCTCTGATTGTCGGGGTTATTTTC 1299
BSNT_00366___ 1300 TTAGCGCTTGTGGTCATTAGTTATTATGTGTTTGGGATTGGCAAACGCAC 1349
.|.|||.||||.|.|...||.||||||||||||||.||||||||.||
BL05014___ybx 1300 CTTGCGGTTGTTGCCGCCAGCTATTATGTGTTTGGAATTGGCAAGCG--- 1346
BSNT_00366___ 1350 GCAGGCCAATTTGACAAAAAGCGAACAAGCAGCT-----GAATAA---- 1389
||.| .||||| ||||||
BL05014___ybx 1347 -----------TGCC-------------TCAGCTGATGGGAATAAATAA 1371
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