Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01258 and BL05055
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence dna-align/BSNT_01258___yfmQ.1.5803.seq
# -bsequence dna-align/BL05055___yfmQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01258___yfmQ-BL05055___yfmQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01258___yfmQ-BL05055___yfmQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01258___yfmQ
# 2: BL05055___yfmQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 471
# Identity: 308/471 (65.4%)
# Similarity: 308/471 (65.4%)
# Gaps: 45/471 ( 9.6%)
# Score: 922.0
#
#
#=======================================
BSNT_01258___ 1 ATGACATGGGCGATCGTGA---TGTTAATTCTCATGAGTCTGGTGAAAAT 47
.||||||||....|.||.| |.||..|..||.|.|||||..|.|||||
BL05055___yfm 1 GTGACATGGCTTTTTGTAACCTTTTTGGTGATCTTCAGTCTTTTTAAAAT 50
BSNT_01258___ 48 CGTATTAACCTGTCTTCCTACAGGCGTCATAGAATGGCTGCTCGGCAAAT 97
..|..|.||.||.|||||.|..||.|||.||||.||||||..||||||||
BL05055___yfm 51 ATTGGTCACTTGCCTTCCGAGCGGTGTCGTAGAGTGGCTGACCGGCAAAT 100
BSNT_01258___ 98 TTGAAGTGCACGCCAAGCTTAGTGG---CGAAAATGCGAGTCTCTCTCTA 144
||.||||.||.|..|||||| |.|| ||||..|.|.|||..|..||
BL05055___yfm 101 TTCAAGTTCATGTGAAGCTT-GAGGAATCGAATGTTCAAGTGACATTC-- 147
BSNT_01258___ 145 GATGGAAAACGTCTCGAGGGTACAGAGAAGCAGAAAGT-GATTGA-TCAA 192
|..|||||||||.|.|||||..|.||.||| ||| ||||.| ||||
BL05055___yfm 148 GGCGGAAAACGTTTAGAGGGATCTGACAAG-----AGTCGATTTATTCAA 192
BSNT_01258___ 193 ---TTTAACGAAGCTGTCTTCCTGGAGAAATATTATATCTATCCAGGTGA 239
|||||.|||||.||.||..|||||...||.||.||.||.||.||.||
BL05055___yfm 193 AACTTTAATGAAGCGGTATTTATGGAGCGGTACTACATATACCCGGGAGA 242
BSNT_01258___ 240 TGAAGAGCGTTATTTACATCCGGAAAATGGCGGCACGCCGCTGGTGATAG 289
|||...||..|||.|..|||||.||||.|.|||.||.|||.|.|||||.|
BL05055___yfm 243 TGAGCCGCTGTATGTCAATCCGAAAAACGCCGGGACACCGTTTGTGATCG 292
BSNT_01258___ 290 ATACAAAAAAAGGAAAAAAAGACGTGAAGCTGTTCGTGTACCGCTACGAC 339
|.||||..|||||||||||.|..|||||||||||.||.|||.|.|||||.
BL05055___yfm 293 AAACAACTAAAGGAAAAAACGCTGTGAAGCTGTTTGTATACAGATACGAT 342
BSNT_01258___ 340 GACCATATCGACGTCGTGAAACAGTACAAGAAGAAAG-TGATCGCGTATC 388
||.|||||.||||||||.|||||.||.||||| |||| .|..|||.|||.
BL05055___yfm 343 GATCATATAGACGTCGTTAAACAATATAAGAA-AAAGACGGCCGCTTATT 391
BSNT_01258___ 389 GAGTGCTTTCTGAAAGCCTTCAAAAAGAGTCTCTGTCA-GTGGCGGGAAG 437
|..|||.||||||.||.||.|||| || |.||.||||.|
BL05055___yfm 392 GTCTGCGTTCTGACAGTCTGCAAA------------CATGCGGGGGGATG 429
BSNT_01258___ 438 -----------TTTAGCTTAA 447
|||...||||
BL05055___yfm 430 AAAACGGCGGATTTGATTTAA 450
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