Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01272 and BL05068

See Amino acid alignment / Visit BSNT_01272 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:47
# Commandline: needle
#    -asequence dna-align/BSNT_01272___yflS.1.5803.seq
#    -bsequence dna-align/BL05068___yflS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01272___yflS-BL05068___yflS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01272___yflS-BL05068___yflS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01272___yflS
# 2: BL05068___yflS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1462
# Identity:    1110/1462 (75.9%)
# Similarity:  1110/1462 (75.9%)
# Gaps:          50/1462 ( 3.4%)
# Score: 4165.0
# 
#
#=======================================

BSNT_01272___      1 ATGGCTTCAGAAAAAGACGCAGGAAAACAGTCAGCAGTAAAGCTTGTTCC     50
                     .|||||..|||||||||.||||.|.||.|.||.|||.|.||..|..||||
BL05068___yfl      1 GTGGCTAAAGAAAAAGATGCAGAACAAAAATCGGCACTGAACATCATTCC     50

BSNT_01272___     51 -ATTGC--------TTATTACTGTCGCTGTGGGACTAATCATCTGGTTTA     91
                      .||||        || |||  ||||..|.||      |.||.|||||||
BL05068___yfl     51 TCTTGCGGTCACGATT-TTA--GTCGGAGCGG------TTATTTGGTTTA     91

BSNT_01272___     92 TTCC--CGCTCCGTCCGGACTTGAACCTAAAGCTTGGCATTTGTTTGCGA    139
                     ||||  ||| ||| |||||.|.||.||.|||||.|||||.||.|||||.|
BL05068___yfl     92 TTCCGTCGC-CCG-CCGGATTGGACCCGAAAGCATGGCACTTATTTGCAA    139

BSNT_01272___    140 TTTTTGTCGCAACAATTATCGGCTTTATCTCCAAGCCCTTGCCAATGGGT    189
                     |.|||||.|||||.||||||||||||||.||.||.||..||||.|||||.
BL05068___yfl    140 TCTTTGTGGCAACGATTATCGGCTTTATATCAAAACCGCTGCCGATGGGG    189

BSNT_01272___    190 GCAATTGCAATTTTTGCATTGGCGGTTACTGCACTAACTGGAACACTATC    239
                     |||||.||..|.||.|||||||||.|.||.||.||.||||||||.||.||
BL05068___yfl    190 GCAATCGCCGTATTCGCATTGGCGATCACGGCGCTCACTGGAACGCTGTC    239

BSNT_01272___    240 AATTGAGGATACATTAAGCGGATTCGGGAATAAGACCATTTGGCTTATCG    289
                     .|||||.||.||..|.|||||.||.||.||.|||||.||||||||.||||
BL05068___yfl    240 GATTGAAGAAACGCTCAGCGGGTTTGGAAACAAGACGATTTGGCTGATCG    289

BSNT_01272___    290 TTATCGCATTCTTTATTTCCCGGGGATTTATCAAAACCGGGCTCGGTGCT    339
                     |.||.||.||.||||||||.|||||||||||.||||||||..|.|||||.
BL05068___yfl    290 TCATTGCCTTTTTTATTTCGCGGGGATTTATTAAAACCGGTTTAGGTGCG    339

BSNT_01272___    340 AGAATTTCGTATGTATTCGTTCAGAAATTCGGGAAAAAAACCCTTGGACT    389
                     .||||..|.|||.||||.||.|.||..|||||.||||||||.||.|||||
BL05068___yfl    340 CGAATCGCCTATTTATTTGTACGGATGTTCGGCAAAAAAACACTCGGACT    389

BSNT_01272___    390 TTCTTATTCACTGCTATTCAGTGATTTAATACTTTCACCTGCTATTCCAA    439
                     .||.||||||||.||..||||.|||||.||..|.||.||.||.||.||.|
BL05068___yfl    390 CTCGTATTCACTCCTTGTCAGCGATTTGATTTTATCGCCGGCGATCCCGA    439

BSNT_01272___    440 GTAATACGGCGCGTGCAGGAGGCATTATATTTCCTATTATCAGATCATTA    489
                     |||||||.||.|||||.||.||.|||||.|||||.||||||.|.||.|||
BL05068___yfl    440 GTAATACCGCACGTGCCGGGGGAATTATTTTTCCGATTATCCGTTCGTTA    489

BSNT_01272___    490 TCCGAAA-----CATTCG--GATCAAGCCCGGCAAATGGAACAGAGAGGA    532
                     |||||||     ||.|||  |..||||..||||  |.|||||     ||.
BL05068___yfl    490 TCCGAAACTTTTCAGTCGACGCCCAAGGACGGC--ACGGAAC-----GGC    532

BSNT_01272___    533 AAATCGGTGCATTTTTATTAAAAACCGGT----TTTCAGGGGAATCTGAT    578
                     ..|||||.||.||.||..|.||    |||    |||||||||||..||||
BL05068___yfl    533 GCATCGGCGCTTTCTTGCTGAA----GGTGGGCTTTCAGGGGAACTTGAT    578

BSNT_01272___    579 CACATCTGCTATGTTCCTGACAGCGATGGCGGCGAACCCGCTGATTGCCA    628
                     |||.|||||.||||||.|.||.||.||||||||.||||||||||||||||
BL05068___yfl    579 CACTTCTGCGATGTTCTTAACGGCTATGGCGGCAAACCCGCTGATTGCCA    628

BSNT_01272___    629 AGCTGGCCCATGATGTCGCAGGGGTGGACTTAACATGGACAAGCTGGGCA    678
                     |.||.|||||||||||.|||||.|||.|..|.||.||||||||||||||.
BL05068___yfl    629 AACTTGCCCATGATGTGGCAGGTGTGAATCTGACCTGGACAAGCTGGGCT    678

BSNT_01272___    679 ATTGCCGCGATTGTGCCGGGACTTGTAAGCTTAATCATCACGCCGCTTGT    728
                     .|.||.||.||.||.|||||||||||.|||||.||||||||.||||||||
BL05068___yfl    679 GTGGCGGCCATCGTCCCGGGACTTGTCAGCTTGATCATCACCCCGCTTGT    728

BSNT_01272___    729 GATTTACAAGCTGTATCCGCCGGAAATCAAAGAAACACCGGATGCGGCGA    778
                     .|||||.||.|||||||||||.||..|.|||.||||.||.||||||||||
BL05068___yfl    729 CATTTATAAACTGTATCCGCCTGAGGTGAAAAAAACGCCTGATGCGGCGA    778

BSNT_01272___    779 AAATCGCAACAGAAAAACTGAAAGAAATGGGACCGTTCAAAAAATCAGAG    828
                     |||||||||||||.||.||.|||||||||||.||||||||||||||.||.
BL05068___yfl    779 AAATCGCAACAGAGAAGCTCAAAGAAATGGGCCCGTTCAAAAAATCGGAA    828

BSNT_01272___    829 CTTTCCATGGTTATCGTGTTTCTTTTG---GTGCTTGTGCTGTGGATTTT    875
                     ||.||.||||   |||.|.|..|||||   ||.|||.|..|.||||||||
BL05068___yfl    829 CTCTCTATGG---TCGCGGTCTTTTTGCTCGTCCTTTTTTTATGGATTTT    875

BSNT_01272___    876 TGGCGGCAGCTTCAACATCGACGCAACCACAACCGCATTGATCGGTTTGG    925
                     .||.||||.|.|.||.||.|||||.||.|||||.||||||||||||||.|
BL05068___yfl    876 CGGAGGCAACCTGAATATTGACGCGACAACAACGGCATTGATCGGTTTAG    925

BSNT_01272___    926 CCGTTCTATTATTATCACAAGTTCTGACTTGGGATGATATCAAGAAAGAA    975
                     ||||.||..|.||..||||.||||||||.|||||.|||||.||||||||.
BL05068___yfl    926 CCGTCCTGCTTTTGACACAGGTTCTGACGTGGGACGATATTAAGAAAGAG    975

BSNT_01272___    976 CAGGGCGCTTGGGATACGCTCACTTGGTTTGCGGCGCTTGTCATGCTCGC   1025
                     ||.|||||.|||||||||||.||.||||||||.|||||.||||||||.||
BL05068___yfl    976 CAAGGCGCATGGGATACGCTGACATGGTTTGCCGCGCTCGTCATGCTGGC   1025

BSNT_01272___   1026 CAACTTCTTGAATGAATTAGGCATGGTATCTTGGTTCAGTAATGCCATGA   1075
                     .|.|||||||||||||.|.||||||||....||||||||..||||.||||
BL05068___yfl   1026 GAGCTTCTTGAATGAACTCGGCATGGTCGGCTGGTTCAGCGATGCGATGA   1075

BSNT_01272___   1076 AATCATCCGTATCAGGGTTCTCTTGGATTGTGGCATTTATCATTTTAATT   1125
                     ||||.|..||.|||||.|||||.|||||....||||||.|||||||||||
BL05068___yfl   1076 AATCGTATGTTTCAGGATTCTCCTGGATCAGCGCATTTCTCATTTTAATT   1125

BSNT_01272___   1126 GTTGTGTATTATTACTCTCACTATTTCTTTGCAAGTGCGACAGCCCACAT   1175
                     |..||.||.|||||.||.||.|||||||||||.|||||.||.||.||.||
BL05068___yfl   1126 GCGGTTTACTATTATTCGCATTATTTCTTTGCGAGTGCAACCGCTCATAT   1175

BSNT_01272___   1176 CAGTGCGATGTATTCAGCATTTTTGGCTGTCGTCGTGGCAGCGGGCGCAC   1225
                     |||.|||||||||||.||.|||.|.||.||..|..|.||.||.|||||.|
BL05068___yfl   1176 CAGCGCGATGTATTCGGCCTTTCTCGCCGTGATTATCGCTGCAGGCGCTC   1225

BSNT_01272___   1226 CGCCGCTTTTAGCAGCGCTGAGCCTCGCGTTCATCAGCAACCTGTTCGGG   1275
                     ||||||||.|.|||||..|.|||||.|||||..||||||||||.||.|..
BL05068___yfl   1226 CGCCGCTTCTCGCAGCATTAAGCCTTGCGTTTTTCAGCAACCTTTTTGCT   1275

BSNT_01272___   1276 TCAACGACTCACTACGGTTCTGGAGCGGCTCCGGTCTTCTTCGGAGCAGG   1325
                     ||.||.||.||.|||||..|.|||||||||||.|||||.|||||.||.||
BL05068___yfl   1276 TCGACAACGCATTACGGAGCGGGAGCGGCTCCCGTCTTTTTCGGGGCCGG   1325

BSNT_01272___   1326 CTACATCCCACAAGGCAAATGGTGGTCCATCGGATTTATCCTGTCGATTG   1375
                     |||.||.||.|||.|||||||||||||.|||||.||.|||.|||||||||
BL05068___yfl   1326 CTATATTCCGCAAAGCAAATGGTGGTCAATCGGCTTCATCTTGTCGATTG   1375

BSNT_01272___   1376 TTCATATCATCGTATGGCTTGTGATCGGCGGATTATGGTGGAAAGTACTA   1425
                     |||||||..|...|||||||||..||||.||.||||||||||||.||||.
BL05068___yfl   1376 TTCATATTGTGACATGGCTTGTTGTCGGAGGGTTATGGTGGAAATTACTG   1425

BSNT_01272___   1426 GGAATATGGTAG   1437
                     ||.||||||||.
BL05068___yfl   1426 GGCATATGGTAA   1437


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