Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01422 and BL05073

See Amino acid alignment / Visit BSNT_01422 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence dna-align/BSNT_01422___sspK.1.5803.seq
#    -bsequence dna-align/BL05073___sspK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01422___sspK-BL05073___sspK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01422___sspK-BL05073___sspK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01422___sspK
# 2: BL05073___sspK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:     113/157 (72.0%)
# Similarity:   113/157 (72.0%)
# Gaps:          11/157 ( 7.0%)
# Score: 399.0
# 
#
#=======================================

BSNT_01422___      1 ATGGTCCGAAATAAAGAAAAAGGATTTCCTTACGAA----AACGAAAACA     46
                     |||   |||||||||..||.|||.||||    ||||    |||.|.||.|
BL05073___ssp      1 ATG---CGAAATAAATCAAGAGGCTTTC----CGAACATGAACAACAATA     43

BSNT_01422___     47 AATTTCAGGGTGAACCGAGAGCAAAGGACGACTATGCTTCAAAGCGTGCT     96
                     |||||.|.||.||.||..|.||.||.||.||.|.||||||||||||..||
BL05073___ssp     44 AATTTGAAGGCGAGCCCCGGGCCAAAGATGATTTTGCTTCAAAGCGCCCT     93

BSNT_01422___     97 GACGGATCTATCAATCAGCATCCTCAAGAAAGAATGAGAGCCTCAGGCAA    146
                     ||||||...|..|||...||||||||||||||||||||.||.||.|||||
BL05073___ssp     94 GACGGAAGCACAAATACTCATCCTCAAGAAAGAATGAGGGCTTCCGGCAA    143

BSNT_01422___    147 ACGGTAA    153
                     |||.|||
BL05073___ssp    144 ACGCTAA    150


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