Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01598 and BL05088

See Amino acid alignment / Visit BSNT_01598 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence dna-align/BSNT_01598___glpP.1.5803.seq
#    -bsequence dna-align/BL05088___glpP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01598___glpP-BL05088___glpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01598___glpP-BL05088___glpP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01598___glpP
# 2: BL05088___glpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 591
# Identity:     421/591 (71.2%)
# Similarity:   421/591 (71.2%)
# Gaps:          48/591 ( 8.1%)
# Score: 1436.0
# 
#
#=======================================

BSNT_01598___      1 ATGAGTTTTCACAACCAGCCGATCTTACCGGCTATTCGCAATATGAAGCA     50
                     ||||||||||||.|.||....||.|||||.||..|.||||||||||||||
BL05088___glp      1 ATGAGTTTTCACGATCAAAATATTTTACCTGCGGTACGCAATATGAAGCA     50

BSNT_01598___     51 ATTTGATGAGTTTTTAAACAGTTCGTTCTCTTACGGTGTTATTCTTGATA    100
                     .||.|||...||..|..||||..|.||.||.|||||.||..|.|||||.|
BL05088___glp     51 GTTCGATACATTCCTGGACAGCCCTTTTTCATACGGGGTGCTGCTTGACA    100

BSNT_01598___    101 TTCATCTCGGCCAGCTGAAGGGCGTGATCAAAGAAGC---GCAAAAGCAC    147
                     |.|||||.||.||||||...|||||||||     |||   ||||.|.|.|
BL05088___glp    101 TCCATCTTGGACAGCTGGGAGGCGTGATC-----AGCGCGGCAAGATCCC    145

BSNT_01598___    148 ---GGAAAGAACATGATGGTGCACGTCGATCTCATTCAAGGGATTAAGCA    194
                        ||||| ||.|||.|.||.|||||||||||.||.|||||.||||||||
BL05088___glp    146 ATGGGAAA-AAAATGTTTGTTCACGTCGATCTGATCCAAGGAATTAAGCA    194

BSNT_01598___    195 TGACGAATACGGTGCGGAATTTATATGTCAGGATATCAAGCCCGCTGGGA    244
                     |||.|||||||||||||||||.||.||.|||||.||.||.||.||.||.|
BL05088___glp    195 TGATGAATACGGTGCGGAATTCATTTGCCAGGAAATGAAACCGGCGGGCA    244

BSNT_01598___    245 TTATTTCCACAAGATCGAACGTGATTGCCAAAGCGAAGCAGAAGAAAATT    294
                     ||.||||.||.|||||.|.|||.||.||||||||.||||||||||||.|.
BL05088___glp    245 TTCTTTCTACGAGATCAAGCGTTATCGCCAAAGCAAAGCAGAAGAAAGTG    294

BSNT_01598___    295 TATGCCATTCAGCGCCTGTTTTTGCTTGATACAAGCGCGATGGAGAAAAG    344
                     |||||.||.||||||.|||||||..|.||.||||||||.|||.||||.||
BL05088___glp    295 TATGCGATCCAGCGCATGTTTTTAATAGACACAAGCGCCATGAAGAAGAG    344

BSNT_01598___    345 CATGGAGTTTATCGG----CAAGCATAAGCCTGACTTCATCGAAGTGCTT    390
                     |||.||    ||.||    .|||||.|..||.||||..||.|||||||||
BL05088___glp    345 CATTGA----ATTGGTGAAAAAGCACAGACCCGACTATATAGAAGTGCTT    390

BSNT_01598___    391 CCCGGCATCGTTCCGTCACTCATTCA-GGAAATAAAAGAGAAAACAGGGA    439
                     |||||..|.||.|||..|.|.| ||| ||||.|.|||||.|.|||.||.|
BL05088___glp    391 CCCGGAGTAGTGCCGGAATTGA-TCAGGGAAGTCAAAGAAATAACCGGCA    439

BSNT_01598___    440 TTCCCATCTTTGCCGG-GGGTTTCATCCGTACGGAAGAGGATGTAGAGCA    488
                     ||||.||||||||.|| |||||| ||||||||.|||.|.||.||.|||||
BL05088___glp    440 TTCCGATCTTTGCGGGCGGGTTT-ATCCGTACCGAAAAAGACGTCGAGCA    488

BSNT_01598___    489 GGC-ATTGAAAGCGGGGGCTGT-AGCTGTCACAACATCTAATACCAAATT    536
                     ||| .||| .|||.||||| || .||.|||||.||.||..|.||..|.||
BL05088___glp    489 GGCGCTTG-CAGCAGGGGC-GTCCGCAGTCACCACCTCAGACACTGATTT    536

BSNT_01598___    537 GTGGAAAAAATA-TGAAAACTTTTTGACAGAAAGTGATTGA    576
                     .||||||||||| || .||||         ||         
BL05088___glp    537 ATGGAAAAAATACTG-GAACT---------AA---------    558


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