Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01599 and BL05089

See Amino acid alignment / Visit BSNT_01599 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence dna-align/BSNT_01599___glpF.1.5803.seq
#    -bsequence dna-align/BL05089___glpF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01599___glpF-BL05089___glpF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01599___glpF-BL05089___glpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01599___glpF
# 2: BL05089___glpF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 843
# Identity:     612/843 (72.6%)
# Similarity:   612/843 (72.6%)
# Gaps:          45/843 ( 5.3%)
# Score: 2132.0
# 
#
#=======================================

BSNT_01599___      1 ATGACAGCATTTTGGGGAGAAGTCATCGGTACGATGCTGCTTATCATTTT     50
                     .||||||||||||||||.|||||.|||||.|||||||||||.|||.|.||
BL05089___glp      1 TTGACAGCATTTTGGGGGGAAGTTATCGGAACGATGCTGCTCATCGTCTT     50

BSNT_01599___     51 TGGTGCAGGTGTTTGTGCAGGTGTCAATTTAAAGAAATCGCTTT--CATT     98
                     |||.||.||.|||||||||||.||.|||||.||.||||||||.|  ||| 
BL05089___glp     51 TGGAGCTGGAGTTTGTGCAGGAGTTAATTTGAAAAAATCGCTGTCCCAT-     99

BSNT_01599___     99 CCAGTCTGGCTGGATTGTTGTTGTATTTGGATGGGGATTGGGTGTTGCCA    148
                      ||.||.||.||||||||..|.||.||.||.|||||..|.||.||.||||
BL05089___glp    100 -CAATCCGGATGGATTGTGATCGTCTTCGGCTGGGGGCTTGGCGTGGCCA    148

BSNT_01599___    149 TGGCGGCATACGCGGTTGGCGGCATCAGCGGTGCCCATTTGAATCCGGCG    198
                     ||||||.|||.||.||.||||||||||||||.||.|||||.||||||||.
BL05089___glp    149 TGGCGGTATATGCCGTCGGCGGCATCAGCGGAGCGCATTTAAATCCGGCC    198

BSNT_01599___    199 CTAACGATAGCGCTTGCATTTGTAGGAGATTTTCCTTGGAAAGAGGTTCC    248
                     .|.||..|.|.|||.||||||||.|||||||||||||||.||||.||.||
BL05089___glp    199 GTTACATTGGGGCTGGCATTTGTCGGAGATTTTCCTTGGGAAGAAGTGCC    248

BSNT_01599___    249 GGTT--TATATTGCGGCGCAAATGATCGGAGCGATCATCGGTGCGGTGAT    296
                       ||  ||||||..||..||.||||||||.||..|..|.||.||||||.|
BL05089___glp    249 --TTCATATATTTTGGGACAGATGATCGGCGCATTTTTAGGAGCGGTGCT    296

BSNT_01599___    297 TATTTATCTGCATTACCTCCCGCACTGGAAGTCAACGGATGATCCCGCTG    346
                     ..|||.|||.||.|||.|.|||||||||||...|||.||.||||..|..|
BL05089___glp    297 CGTTTTTCTTCACTACTTGCCGCACTGGAAAGAAACCGAGGATCAAGGCG    346

BSNT_01599___    347 CCAAGCTGGGTGTTTTCTCAACAGGGCCCAGC-ATTCCGCATACATTTGC    395
                     |.|||||.||.||.||.||.||| ||.||.|| |||||..||||||||||
BL05089___glp    347 CGAAGCTTGGAGTATTTTCGACA-GGTCCGGCGATTCCAAATACATTTGC    395

BSNT_01599___    396 AAACGTTTTAAGCGAAGTGATT-GGGACATTTGTCCTTGTACTTGGAATC    444
                     ||||.|.||.||.||| ..||| |||||.|||.|.||.||.||.|||.|.
BL05089___glp    396 AAACCTGTTCAGTGAA-ACATTGGGGACTTTTATTCTCGTTCTCGGACTT    444

BSNT_01599___    445 TTGGCCATTGGGGCAAATCAA-TTTACAGAAGGACTTAATCCTTTAATCG    493
                     ||..|.||.||.||||| ||| |||||.||.|||||.||||||.|..|.|
BL05089___glp    445 TTAACGATCGGTGCAAA-CAAGTTTACTGACGGACTGAATCCTCTTGTTG    493

BSNT_01599___    494 TCGGTTTCCTCATTGTAGCAATCGGTATTTCTCTGGGAGGCACCACCGGC    543
                     ||||.||.||.||.||.||.||||||||.||.||.||.||.||.||.|||
BL05089___glp    494 TCGGATTTCTGATCGTGGCGATCGGTATCTCGCTCGGCGGAACAACAGGC    543

BSNT_01599___    544 TATGCTATCAATCCTGCACGTGACTTAGGTCCGCGGATAGCCCACGCTTT    593
                     |||||.||.||.|||||.||.||..|.||.|||.|.||.|||||   |||
BL05089___glp    544 TATGCGATTAACCCTGCCCGCGATCTGGGGCCGAGAATTGCCCA---TTT    590

BSNT_01599___    594 T---CTTCCAATTCCGGGGAAGGGCTCATCAAACTGGAAATACGCATGGG    640
                     |   |||||.|||.|.||.||.||....|||||||||||.|||||.|||.
BL05089___glp    591 TGTCCTTCCGATTGCAGGCAAAGGGAGTTCAAACTGGAAGTACGCGTGGA    640

BSNT_01599___    641 TTCCGGTAGTCGGCCCGATTTTAGGCGGATCATTCGGCGGTGTATTTTAC    690
                     |.||.||..|.||.|||....|.|||||.|||||.|..||.||.||||||
BL05089___glp    641 TCCCTGTTTTAGGACCGGCGCTTGGCGGTTCATTTGCAGGCGTTTTTTAC    690

BSNT_01599___    691 AACGCTGCATTTAAAGGGCACATCACAAGCAGCTTCTGGATTGTAAGCGT    740
                     |||||.|.|||.||||||||.|||||||.||..||.||||||||||||||
BL05089___glp    691 AACGCCGTATTCAAAGGGCATATCACAAACACATTTTGGATTGTAAGCGT    740

BSNT_01599___    741 TATATTGGTTGTGGTATTGTTAGGACTCTATGTTTATACGAAATCATATT    790
                     ||||.|.||||||.||||||||||..|||||.||.|||.|||        
BL05089___glp    741 TATACTAGTTGTGATATTGTTAGGTTTCTATATTCATATGAA--------    782

BSNT_01599___    791 CTGCTAAAACA------TTATCAAATTC--TAAATATATTTAA    825
                          ||||||      |.|||||  ||  |.|  |.||||||
BL05089___glp    783 -----AAAACAAGCAGTTGATCAA--TCGGTCA--ACATTTAA    816


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01599 and BL05089

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
