Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01681 and BL05091
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_01681___yhaX.1.5803.seq
# -bsequence dna-align/BL05091___yhaX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01681___yhaX-BL05091___yhaX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01681___yhaX-BL05091___yhaX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01681___yhaX
# 2: BL05091___yhaX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 886
# Identity: 642/886 (72.5%)
# Similarity: 642/886 (72.5%)
# Gaps: 41/886 ( 4.6%)
# Score: 2248.0
#
#
#=======================================
BSNT_01681___ 1 GTGTCAAAACAATTGCTTGCCTTAAATATAGATGGAGCGCTGCTTCGGTC 50
||||||||||||.|||||||..|.||||||||.|||.|||||||||||.|
BL05091___yha 1 GTGTCAAAACAAATGCTTGCGCTGAATATAGACGGAACGCTGCTTCGGAC 50
BSNT_01681___ 51 GAACGGGAAGATTCATCAGGCAACGAAAGACGCGATTGAATATGTAAAGA 100
.|||||...|.||||||..||||||||.||.|||||.|||||||.|||||
BL05091___yha 51 AAACGGACGGCTTCATCCCGCAACGAAGGAAGCGATCGAATATGCAAAGA 100
BSNT_01681___ 101 AAAAAGGGATTTACGTCACACTTGTGACCAACCGTCATTTTCGCTCAGCA 150
|.|||||..|.||.||.||.||||||||.|||.|.|||||.|||||.||.
BL05091___yha 101 AGAAAGGTGTATATGTTACGCTTGTGACGAACAGACATTTCCGCTCCGCT 150
BSNT_01681___ 151 CAGAAAATAGCGAAATCGCTAAAGCTTGATGCCAAGCTGATCACCCATAG 200
||.|||||.||.|||||..|||||||.|||||.||||||||.||.||.||
BL05091___yha 151 CAAAAAATCGCCAAATCTTTAAAGCTGGATGCGAAGCTGATTACGCACAG 200
BSNT_01681___ 201 CGGGGC-ATATATCGCTGAGAAAATTGACGCCCCGTTTTTTGAAAAAAGA 249
|||.|| || |||.||.||.|||||.|.||..||.||.||.||||||||.
BL05091___yha 201 CGGAGCGAT-TATAGCGGACAAAATCGCCGAACCTTTATTAGAAAAAAGG 249
BSNT_01681___ 250 ATTTCTGATGATCATACCTTTAACATTGTTCAAGTGCTGGAGAGCTATCA 299
|||||.||.||.||.||.||||||.||||||||.|.|||||.||||||.|
BL05091___yha 250 ATTTCCGAAGAACAGACATTTAACCTTGTTCAAATACTGGAAAGCTATGA 299
BSNT_01681___ 300 ATGTAATATTCGGCTTCTTCACGAAAAGTATTCCATCGGAAACAAGAAAA 349
.||.|||||..|..|.||.||.|||||.|||||.||.|||||...|||||
BL05091___yha 300 TTGCAATATCAGAATCCTCCATGAAAAATATTCGATTGGAAATCGGAAAA 349
BSNT_01681___ 350 AGGTGAATTCGAATTTATTGGGGAAAGCACTCATTCATCCGTCTGACCCG 399
|...||||||.||..|..||||||||.|..|.|||||.||||||||||||
BL05091___yha 350 AAACGAATTCAAACCTGCTGGGGAAAACGATGATTCACCCGTCTGACCCG 399
BSNT_01681___ 400 ATCTTCTATCCAGTCCAGTTCGTTGAATCATTAAGCGATCTCCTCATGGA 449
||.||.|||||.||||||||.||.||.||..|.|||||..|.||.|||||
BL05091___yha 400 ATTTTTTATCCCGTCCAGTTTGTCGATTCGCTGAGCGACATGCTGATGGA 449
BSNT_01681___ 450 TGAGCCGGTGAGTGCACCCGTCATCGAGGTGTA---CACGGAGCACGACA 496
|||.|||||.||.||.||.||.||||||||.|| |.| |.||.|.||
BL05091___yha 450 TGAACCGGTCAGCGCGCCGGTGATCGAGGTTTATTGCTC--AACAGGTCA 497
BSNT_01681___ 497 TTCAGCATGACATTACAG--AAACGATTACAAAAGCCTTCCCTGCAGTGG 544
.||.| |.||.|| ||| |.|||||.|||||.||.||.|||...||.|
BL05091___yha 498 GTCCG-AAGAAAT--CAGGCAGACGATCACAAATGCGTTTCCTCTCGTCG 544
BSNT_01681___ 545 ATGTGATTCGCGTAAACGATGAGAA-----GCTGAATATCGTCCCGAAAG 589
|..|.||| .||.|| .||||| |||| ||.||||..||||
BL05091___yha 545 ACATCATT----GAAGCG-GGAGAAAAAATGCTG---ATTGTCCATAAAG 586
BSNT_01681___ 590 GTGTCTCGAAGGAAGCGGGTTTGGCCCTCGTCGCTTCAGAGCTGGGCCTG 639
|.||.|||||.||||||||.|||.|..|..||||..|.||.||.||..|.
BL05091___yha 587 GAGTTTCGAAAGAAGCGGGATTGACGATGCTCGCCGCCGACCTCGGATTA 636
BSNT_01681___ 640 AGTATGGATGATGTCGTGGCCATTGGGCATCAGTAT-GACGATCTGCCGA 688
|..|||||.||||||||.||.||.||.|||.| ||| |||||.||.||||
BL05091___yha 637 AAAATGGAAGATGTCGTTGCGATCGGCCATGA-TATCGACGACCTTCCGA 685
BSNT_01681___ 689 TGATCGAACTTGCCGGTCTTGGGGTAGCGATGGGGAATGCCGTTCCGGAA 738
|||||||.||||||||.||.||.||.||.|||||.|||||...||.|||.
BL05091___yha 686 TGATCGAGCTTGCCGGGCTCGGAGTCGCAATGGGCAATGCTCCTCAGGAG 735
BSNT_01681___ 739 ATTAAGAGAAAGGCAGATTGGGTTACAAGGTCCAATGACGAGCAAGGTGT 788
.|||||..|||.||.||||||||.||..|.||||||||.||.||.||.||
BL05091___yha 736 GTTAAGCAAAAAGCGGATTGGGTGACGCGCTCCAATGATGAACAGGGCGT 785
BSNT_01681___ 789 CGCTTATATGATGAAGGAATATTTCCGAATGCAGCAGCGAAAAGGATTTC 838
|||.||||||||.||.|||||.|||.||||||||||..|.|||||.||||
BL05091___yha 786 CGCCTATATGATTAAAGAATACTTCAGAATGCAGCAAAGCAAAGGGTTTC 835
BSNT_01681___ 839 TTGATAAGTTCCACATGAAACGTGTGTAA------- 867
||.|.||.|||||.||.||| ||
BL05091___yha 836 TTAAAAAATTCCATATTAAA-------AAAATCTGA 864
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