Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01821 and BL05101

See Amino acid alignment / Visit BSNT_01821 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence dna-align/BSNT_01821___gerPD.1.5803.seq
#    -bsequence dna-align/BL05101___gerPD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01821___gerPD-BL05101___gerPD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01821___gerPD-BL05101___gerPD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01821___gerPD
# 2: BL05101___gerPD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity:     134/180 (74.4%)
# Similarity:   134/180 (74.4%)
# Gaps:           3/180 ( 1.7%)
# Score: 498.0
# 
#
#=======================================

BSNT_01821___      1 ATGATCTTTACAGTCATCAACCGCAGCTTGGAAGTCGGGGACATCCGGAT     50
                     ||||..|||||.||..|.||||||.|.||.||.||.||..|.||...|||
BL05101___ger      1 ATGAATTTTACCGTTGTGAACCGCTGTTTTGATGTAGGCAATATTGTGAT     50

BSNT_01821___     51 GAACGGTGTGTCCAGTTCCTCCGTTTTCCACATCGGAGACACTGAATCCA    100
                     .|.|||||||||||.|||.||.|||||.|...||||.||.||.||.|.||
BL05101___ger     51 CACCGGTGTGTCCACTTCTTCTGTTTTTCTGGTCGGTGATACGGATTGCA    100

BSNT_01821___    101 TCTACCTGTCTTCTATTTTTGATACACCGCCTGAATCTCTTATTATCGGG    150
                     |.|..|||||.||.||||||||||||||||||||||||||.|||.|||||
BL05101___ger    101 TTTCTCTGTCATCGATTTTTGATACACCGCCTGAATCTCTCATTGTCGGG    150

BSNT_01821___    151 CCGTTTGTTCCGATTGCGCCAGAATAA---    177
                     ||||||||.|||.|.|||||.||||.|   
BL05101___ger    151 CCGTTTGTCCCGCTGGCGCCGGAATCATGA    180


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