Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01829 and BL05102
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:20
# Commandline: needle
# -asequence dna-align/BSNT_01829___yisI.1.5803.seq
# -bsequence dna-align/BL05102___yisI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01829___yisI-BL05102___yisI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01829___yisI-BL05102___yisI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01829___yisI
# 2: BL05102___yisI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 202
# Identity: 116/202 (57.4%)
# Similarity: 116/202 (57.4%)
# Gaps: 53/202 (26.2%)
# Score: 337.0
#
#
#=======================================
BSNT_01829___ 1 ATGAACAGTAAAATTGAAG--AAATGA--GGATCACACTAATTGAAACCG 46
|||||||.||||||||||| |||.|| || |..||.|||||.|.|
BL05102___yis 1 ATGAACAATAAAATTGAAGCAAAAAGACTGG----CCTTATTTGAAGCTG 46
BSNT_01829___ 47 CACAAAAATACGGCATGAATTCAAAAGAAACGATTCAATGCAGCCAAGAG 96
|..||||.|.||||||.||.||.|||||..|.||||.||||||.||.||.
BL05102___yis 47 CCGAAAAGTTCGGCATCAACTCCAAAGAGGCCATTCGATGCAGTCAGGAA 96
BSNT_01829___ 97 CTGGATATCCTGCTGAATACCCGGATTAAAGAA---GAAATGATTTTTGG 143
.||||.|.|.|||||| ||.|||||| .|||.|||
BL05102___yis 97 TTGGACAACTTGCTGA--------ATCAAAGAATGCAAAAGGAT------ 132
BSNT_01829___ 144 GAGATATCT-----------------TGAAAA------CTCCCGT-ATGT 169
||||.|| .||||| |.|.||| |||.
BL05102___yis 133 --GATAACTGCGTGCATGCGGAAGAAAGAAAAGGCCGCCACACGTCATGA 180
BSNT_01829___ 170 AA 171
BL05102___yis 180 -- 180
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