Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04728 and BL05105

See Amino acid alignment / Visit BSNT_04728 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence dna-align/BSNT_04728___guaC.1.5803.seq
#    -bsequence dna-align/BL05105___guaC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04728___guaC-BL05105___guaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04728___guaC-BL05105___guaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04728___guaC
# 2: BL05105___guaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 983
# Identity:     816/983 (83.0%)
# Similarity:   816/983 (83.0%)
# Gaps:           4/983 ( 0.4%)
# Score: 3388.0
# 
#
#=======================================

BSNT_04728___      1 ATGGAAAACGTATTTGATTACGAAGATATTCAGCTAATTCCTGCAAAATG     50
                     .|||||||.|||||||||||||||||||||||.||||||||||||||.||
BL05105___gua      1 TTGGAAAATGTATTTGATTACGAAGATATTCAACTAATTCCTGCAAAGTG     50

BSNT_04728___     51 CATTGTAAATAGCCGTTCAGAATGTGATACATCCGTAC-GTTTAGGCGGA     99
                     |||.||.||.||||||||.|||||||||||||||||.| |||| ||||||
BL05105___gua     51 CATCGTCAAGAGCCGTTCTGAATGTGATACATCCGTGCAGTTT-GGCGGA     99

BSNT_04728___    100 CGTACATTTAAATTGCCCGTCGTCCCTGCCAATATGCAGACGATTATAGA    149
                     .|.|||||||||.||||.|||||.||.||||||||||||||.||||||||
BL05105___gua    100 AGGACATTTAAACTGCCTGTCGTGCCGGCCAATATGCAGACCATTATAGA    149

BSNT_04728___    150 TGAAAAACTAGCGATTTCATTAGCCGAAAATGGCTACTTTTATGTGATGC    199
                     ||||||.||.||..||||||||||.|||||.||.||||||||||||||||
BL05105___gua    150 TGAAAAGCTGGCTGTTTCATTAGCGGAAAACGGTTACTTTTATGTGATGC    199

BSNT_04728___    200 ACCGATTTGAACCTGAAAAACGGATTGATTTTATTAAAGATATGAACGCA    249
                     ||||.|||||.||.||||.||||||.||||||||||||||.|||||.|||
BL05105___gua    200 ACCGCTTTGAGCCGGAAACACGGATCGATTTTATTAAAGACATGAAGGCA    249

BSNT_04728___    250 CGCGGGTTATTCTCTTCTATCAGCGTGGGCGTCAAAGATGAGGAGTATGA    299
                     |||||.||.||.|||||.||||||||.||.|||||||||||.||.||.|.
BL05105___gua    250 CGCGGTTTGTTTTCTTCAATCAGCGTCGGAGTCAAAGATGAAGAATACGC    299

BSNT_04728___    300 ATTTGTCCGCCAGCTGGCAGA-AGAAAATCTGACTCCTGAATACGTGACA    348
                     .|||.||....|||||.| || |||.|||||.||.||.||.|||.|.||.
BL05105___gua    300 GTTTATCGAAGAGCTGAC-GAGAGAGAATCTCACACCCGAGTACATCACG    348

BSNT_04728___    349 ATTGACATTGCTCACGGGCACTCAAATGCTGTCATTGAAATGATCCAGCA    398
                     ||.||.||.||.|||||.||||||||.||.|||||..|.|||||.|||||
BL05105___gua    349 ATCGATATCGCCCACGGTCACTCAAACGCCGTCATCAATATGATTCAGCA    398

BSNT_04728___    399 CCTTAAAAAACATTTGCCGGACAGCTTTGTTATTGCTGGCAACGTCGGAA    448
                     |.|||||||||||.|.||||||||||||||.||.||.||.||.|||||||
BL05105___gua    399 CATTAAAAAACATCTTCCGGACAGCTTTGTGATCGCAGGAAATGTCGGAA    448

BSNT_04728___    449 CGCCGGAAGCGGTCAGAGAGCTTGAAAATGCGGGAGCGGATGCCACTAAA    498
                     ||||.|||||.||.||||||||||||||.||.|||||.||.||.||.|||
BL05105___gua    449 CGCCTGAAGCTGTTAGAGAGCTTGAAAACGCCGGAGCCGACGCTACAAAA    498

BSNT_04728___    499 GTCGGCATCGGACCGGGAAAAGTATGTATTACGAAAATCAAAACCGGCTT    548
                     |||||||||||.||.||||||||.||.|||||.||||||||||||||.||
BL05105___gua    499 GTCGGCATCGGTCCCGGAAAAGTCTGCATTACAAAAATCAAAACCGGTTT    548

BSNT_04728___    549 CGGCACAGGCGGCTGGCAATTAGCGGCGCTGCGCTGGTGTGCCAAGGCTG    598
                     .||.||.|||||.|||||..|.||.||||||||||||||.||.||.||.|
BL05105___gua    549 TGGAACGGGCGGATGGCAGCTGGCTGCGCTGCGCTGGTGCGCAAAAGCGG    598

BSNT_04728___    599 CCAGCAAACCGATTATCGCGGATGGCGGCATCCGCACCCATGGCGACATC    648
                     |.|||||.|||||.||.||.||.|||||||||||||||||.||.||||||
BL05105___gua    599 CAAGCAAGCCGATCATTGCTGACGGCGGCATCCGCACCCACGGAGACATC    648

BSNT_04728___    649 GCAAAATCAATCCGATTCGGCGCAACGATGGTCATGATCGGTTCACTATT    698
                     ||.|||||..||.|||||||.||.||.|||||||||||||||||.||.||
BL05105___gua    649 GCCAAATCGGTCAGATTCGGGGCGACAATGGTCATGATCGGTTCGCTGTT    698

BSNT_04728___    699 TGCCGGACACGAAGAATCGCCAGGCCAAACGATCGAAAAAGACGGAAAGC    748
                     |||||||||||||||||||||.||...||||||||||||||||||.||||
BL05105___gua    699 TGCCGGACACGAAGAATCGCCTGGAGCAACGATCGAAAAAGACGGCAAGC    748

BSNT_04728___    749 TTTACAAGGAGTACTTCGGCTCAGCCTCTGAATTCCAAAAAGGCGAAAAG    798
                     |.|||||.||.||.||.||.|||||.|||||.|.||||||||||||||||
BL05105___gua    749 TCTACAAAGAATATTTTGGTTCAGCTTCTGAGTACCAAAAAGGCGAAAAG    798

BSNT_04728___    799 AAAAATGTCGAAGGCAAAAAAATGCATGTGGCGCATAAAGGCTCAATCAA    848
                     ||||||||||||||||||||||||.|.||||.||||||||||.|.||||.
BL05105___gua    799 AAAAATGTCGAAGGCAAAAAAATGTACGTGGAGCATAAAGGCGCGATCAT    848

BSNT_04728___    849 GGATACACTGATTGAAATGGAGCAGGATCTTCAATCTTCTATTTCTTATG    898
                     ||||||.||||..||||||||.||||||||.||.||.||.||||||||||
BL05105___gua    849 GGATACGCTGACAGAAATGGAACAGGATCTGCAGTCGTCCATTTCTTATG    898

BSNT_04728___    899 CAGGCGGAACAAAGCTTGACGCCATCCGCAATGTGGATTATGTGATTGTG    948
                     |.||.||||..|||||.||.||.||||||||.||.||.|||||.||.||.
BL05105___gua    899 CGGGAGGAAACAAGCTCGATGCGATCCGCAACGTAGACTATGTCATCGTT    948

BSNT_04728___    949 AAGAATTCCATTTTTAATGGGGATAAATATTAA    981
                     ||.|||||.|||||.|||||||||.||||||||
BL05105___gua    949 AAAAATTCTATTTTCAATGGGGATCAATATTAA    981


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